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Deep correction of DNA sequencing errors by data mining algorithms

Project Member(s): Li, J., Hutvagner, G., Catchpoole, D.

Funding or Partner Organisation: Australian Research Council (ARC Discovery Projects)
Australian Research Council (ARC Discovery Projects)

Start year: 2018

Publications:

Lan, C, Peng, H, Hutvagner, G & Li, J 2019, 'Construction of competing endogenous RNA networks from paired RNA-seq data sets by pointwise mutual information.', BMC genomics, vol. 20, no. Suppl 9.
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Liu, Y, Yu, Y, Dinger, ME & Li, J 2019, 'Index suffix-prefix overlaps by (w, k)-minimizer to generate long contigs for reads compression.', Bioinformatics, vol. 35, no. 12, pp. 2066-2074.
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Smith, CM, Catchpoole, D & Hutvagner, G 2019, 'Non-Coding RNAs in Pediatric Solid Tumors', Frontiers in Genetics, vol. 10.
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Peng, H, Zheng, Y, Zhao, Z, Liu, T & Li, J 2018, 'Recognition of CRISPR/Cas9 off-target sites through ensemble learning of uneven mismatch distributions.', Bioinformatics, vol. 34, no. 17, pp. i757-i765.
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Lan, C, Peng, H, McGowan, EM, Hutvagner, G & Li, J 2018, 'An isomIR expression panel based novel breast cancer classification approach using improved mutual information', International Conference on Genome Informatics, Kunming, Yunnan, China.
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FOR Codes: Application Tools and System Utilities, Pattern Recognition and Data Mining, Bioinformatics Software