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Publications

Books

Kumar, M & Reddy, CRK 2012, Oxidative stress tolerance mechanisms in marine macroalgae (Seaweeds): Oxidative stress in seaweeds., LAP Lambert Academic Publishing.

Chapters

Larkum, A 2012, 'Harvesting solar energy through natural or artificial photosynthesis: Scientific, social, political and economic implications' in Wydrzynski, TJ & Hillier, W (eds), Molecular Solar Fuels, Royal Society of Chemistry, United Kingdom, pp. 1-19.
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Raven, JA 2012, 'Carbon' in Ecology of Cyanobacteria II: Their Diversity in Space and Time, Springer, pp. 443-460.
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Journal articles

Al-Najjar, MA, de Beer, D, Kuhl, M & Polerecky, L 2012, 'Light utilization efficiency in photosynthetic microbial mats', Environmental Microbiology, vol. 14, no. 4, pp. 982-992.
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Ashworth, J, Wurtmann, EJ & Baliga, NS 2012, 'Reverse engineering systems models of regulation: discovery, prediction and mechanisms', CURRENT OPINION IN BIOTECHNOLOGY, vol. 23, no. 4, pp. 598-603.
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Behrendt, L, Larkum, A, Trampe, E, Norman, A, Sørensen, S & Kuhl, M 2012, 'Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella', ISME Journal, vol. 6, no. 6, pp. 1222-1237.
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Behrendt, L, Schrameyer, V, Qvortrup, K, Lundin, L, Sørensen, S, Larkum, A & Kuhl, M 2012, 'Biofilm growth and near-infrared radiation-driven photosynthesis of the chlorophyll d-containing cyanobacterium Acaryochloris marina', Applied and Environmental Microbiology, vol. 78, no. 11, pp. 3896-3904.
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Bragg, JG, Quigg, A, Raven, JA & Wagner, A 2012, 'Protein elemental sparing and codon usage bias are correlated among bacteria', MOLECULAR ECOLOGY, vol. 21, no. 10, pp. 2480-2487.
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Buxton, LJ, Takahashi, S, Hill, R & Ralph, PJ 2012, 'Variability in the primary site of photosynthetic damage in Symbiodinium sp. (Dinophyceae) exposed to thermal stress', Journal of Phycology, vol. 48, no. 1, pp. 117-126.
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Camp, E & Fraser, D 2012, 'Influence of conservation education dive briefings as a management tool on the timing and nature of recreational SCUBA diving impacts on coral reefs', OCEAN & COASTAL MANAGEMENT, vol. 61, pp. 30-37.
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Ceh, J, Raina, J, Soo, RM, van Keulen, M & Bourne, DG 2012, 'Coral-Bacterial Communities before and after a Coral Mass Spawning Event on Ningaloo Reef', PLoS One, vol. 7, no. 5.
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Chappaz-Gillot, C, Marek, PL, Blaive, BJ, Canard, G, Burck, J, Garab, G, Hahn, H, Javorfi, T, Kelemen, L, Krupke, R, Mossinger, D, Ormos, P, Reddy, CM, Roussel, C, Steinbach, G, Szabo, M, Ulrich, AS, Vanthuyne, N, Vijayaraghavan, A, Zupcanova, A & Balaban, TS 2012, 'Anisotropic organization and microscopic manipulation of self-assembling synthetic porphyrin microrods that mimic chlorosomes: Bacterial light-harvesting systems', Journal of the American Chemical Society, vol. 134, no. 2, pp. 944-954.
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Clifton, J, Etienne, M, Barnes, DK, Barnes, RS, Suggett, DJ & Smith, DJ 2012, 'Marine conservation policy in Seychelles: Current constraints and prospects for improvement', Marine Policy, vol. 36, no. 3, pp. 823-831.
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Craggs, R, Sutherland, D & Campbell, H 2012, 'Hectare-scale demonstration of high rate algal ponds for enhanced wastewater treatment and biofuel production', JOURNAL OF APPLIED PHYCOLOGY, vol. 24, no. 3, pp. 329-337.
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Dongen-Vogels, V, Seymour, JR, Middleton, JF, Mitchell, JG & Seuront, L 2012, 'Shifts in picophytoplankton community structure influenced by changing upwelling conditions', Estuarine Coastal And Shelf Science, vol. 109, pp. 81-90.
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Dunn, SR, Pernice, M, Green, K, Hoegh-Guldberg, O & Dove, SG 2012, 'Thermal Stress Promotes Host Mitochondrial Degradation in Symbiotic Cnidarians: Are the Batteries of the Reef Going to Run Out?', PLOS ONE, vol. 7, no. 7.
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Exton, DA, Suggett, DJ, Steinke, M & McGenity, TJ 2012, 'Spatial and temporal variability of biogenic isoprene emissions from a temperate estuary', Global Biogeochemical Cycles, vol. 26, no. 2, pp. 1-13.
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Fabricius-Dyg, J, Mistlberger, G, Staal, M, Borisov, SM, Klimant, I & Kuhl, M 2012, 'Imaging of surface O2 dynamics in corals with magnetic micro optode particles', Marine Biology, vol. 159, no. 7, pp. 1621-1631.
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Fabris, M, Matthijs, M, Rombauts, S, Vyverman, W, Goossens, A & Baart, GJE 2012, 'The metabolic blueprint of Phaeodactylum tricornutum reveals a eukaryotic Entner-Doudoroff glycolytic pathway', Plant Journal, vol. 70, no. 6, pp. 1004-1014.
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Farrell, H, Gentien, P, Fernand, L, Lunven, M, Reguera, B, González-Gil, S & Raine, R 2012, 'Scales characterising a high density thin layer of Dinophysis acuta Ehrenberg and its transport within a coastal jet', Harmful Algae, vol. 15, pp. 36-46.
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Flynn, KJ, Blackford, JC, Baird, ME, Raven, J, Clark, DR, Beardall, J, Brownlee, C, Fabian, H & Wheeler, GL 2012, 'Changes in pH at the exterior surface of plankton with ocean acidification', Nature Climate Change, vol. 2, no. 7, pp. 510-513.
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Flynn, KJ, Blackford, JC, Baird, ME, Raven, JA, Clark, DR, Beardall, J, Brownlee, C, Fabian, H & Wheeler, GL 2012, 'Changes in pH at the exterior surface of plankton with ocean acidification (vol 2, pg 510, 2012)', NATURE CLIMATE CHANGE, vol. 2, no. 10, pp. 760-760.
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Gilbert, JA, Hill, R, Doblin, MA & Ralph, PJ 2012, 'Microbial consortia increase thermal tolerance of corals', Marine Biology, vol. 159, pp. 1763-1771.
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Glanville, EJ, Murray, SA & Seebacher, F 2012, 'Thermal adaptation in endotherms: climate and phylogeny interact to determine population-level responses in a wild rat', Functional Ecology, vol. 26, no. 2, pp. 390-398.
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Green, B, Suggett, DJ, Hills, AJ & Steinke, M 2012, 'Optimisation of a fast DMS sensor (FDS) for real time quantification of dimethyl sulfide production by algae', Biogeochemistry, vol. 110, no. 1-3, pp. 163-172.
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Gupta, V, Bijo, AJ, Kumar, M, Reddy, CRK & Jha, B 2012, 'Detection of Epigenetic Variations in the Protoplast-Derived Germlings of Ulva reticulata Using Methylation Sensitive Amplification Polymorphism (MSAP)', MARINE BIOTECHNOLOGY, vol. 14, no. 6, pp. 692-700.
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Hallegraeff, GM, Blackburn, S, Doblin, MA & Bolch, C 2012, 'Global toxicology, ecophysiology and population relationships of the chainforming PST dinoflagellate Gymnodinium catenatum', Harmful Algae, vol. 14, pp. 130-143.
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Hildebrand, M, Davis, AK, Smith, SR, Traller, JC & Abbriano, R 2012, 'The place of diatoms in the biofuels industry', Biofuels, vol. 3, no. 2, pp. 221-240.
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Hill, R, Larkum, A, Prasil, O, Kramer, DM, Szabo, M, Kumar, V & Ralph, PJ 2012, 'Light-induced dissociation of antenna complexes in the symbionts of scleractinian corals correlates with sensitivity to coral bleaching', Coral Reefs, vol. 31, pp. 963-975.
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Hoppenrath, M, Murray, SA, Sparmann, SF & Leander, BS 2012, 'Morphology and molecular phylogeny of Ankistrodinium Gen. Nov (Dinophyceae), a new genus of marine sand-dwelling dinoflagellates formerly classified within Amphidinium', Journal Of Phycology, vol. 48, no. 5, pp. 1143-1152.
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Humphreys, W, Tetu, S, Elbourne, L, Gillings, M, Seymour, JR, Mitchell, J & Paulsen, I 2012, 'Geochemical and microbial diversity of Bundera Sinkhole, an anchialine system in the eastern Indian Ocean', Natura Croatica, vol. 21, no. S1, pp. 59-63.
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Huusgaard, R, Vismann, B, Kuhl, M, Macnaugton, M, Colmander, V, Rouse, GW, Glover, AG, Dahlgren, T & Worsaae, K 2012, 'The Potent Respiratory System Of Osedax Mucofloris (Siboglinidae, Annelida) - A Prerequisite For The Origin Of Bone-Eating Osedax?', Plos One, vol. 7, no. 4, pp. 1-14.
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Jajoo, A, Szabo, M, Zsiros, O & Garab, G 2012, 'Low pH induced structural reorganization in thylakoid membranes', Biochimica et Biophysica Acta, vol. 1817, pp. 1388-1391.
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Jeffries, TC, Seymour, JR, Newton, K, Smith, RJ, Seuront, L & Mitchell, JG 2012, 'Increases in the abundance of microbial genes encoding halotolerance and photosynthesis along a sediment salinity gradient', Biogeosciences, vol. 9, no. 2, pp. 815-825.
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Jimenez Denness, IM, Larkum, A, Ralph, PJ & Kuhl, M 2012, 'In situ thermal dynamics of shallow water corals is affected by tidal patterns and irradiance', Marine Biology, vol. 159, pp. 1773-1782.
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Jimenez Denness, IM, Larkum, A, Ralph, PJ & Kuhl, M 2012, 'Thermal effects of tissue optics in symbiont-bearing reef-building corals', Limnology and Oceanography, vol. 57, no. 6, pp. 1816-1825.
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Jokic, T, Borisov, SM, Saf, R, Nielsen, DA, Kuhl, M & Klimant, I 2012, 'Highly photostable near-infrared fluorescent pH indicators and sensors based on BF2-chelated tetraarylazadipyrromethene dyes', Analytical Chemistry, vol. 84, pp. 6723-6730.
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Kahlke, T & Thorvaldsen, S 2012, 'Molecular Characterization of Cold Adaptation of Membrane Proteins in the Vibrionaceae Core-Genome', PLOS ONE, vol. 7, no. 12.
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Kahlke, T, Goesmann, A, Hjerde, E, Willassen, NP & Haugen, P 2012, 'Unique core genomes of the bacterial family vibrionaceae: insights into niche adaptation and speciation', BMC GENOMICS, vol. 13.
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Katrib, M, Ikin, RJ, Brossier, F, Robinson, M, Slapetova, I, Sharman, PA, Walker, RA, Belli, SI, Tomley, FM & Smith, NC 2012, 'Stage-specific expression of protease genes in the apicomplexan parasite, Eimeria tenella', BMC GENOMICS, vol. 13.
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Krull, CR, Ranjard, L, Landers, TJ, Ismar, SMH, Matthews, JL & Hauber, ME 2012, 'Analyses of sex and individual differences in vocalizations of Australasian gannets using a dynamic time warping algorithm', JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA, vol. 132, no. 2, pp. 1189-1198.
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Kuhl, M, Behrendt, L, Trampe, E, Qvortrup, K, Schreiber, U, Borisov, SM, Klimant, I & Larkum, A 2012, 'Microenvironmental ecology of the chlorophyll b-containing symbiotic cyanobacterium Prochloron in the didemnid ascidian Lissoclinum patella', Frontiers in Microbiology, vol. 3, pp. 1-18.
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Kumar, M, Bijo, AJ, Baghel, RS, Reddy, CRK & Jha, B 2012, 'Selenium and spermine alleviate cadmium induced toxicity in the red seaweed Gracilaria dura by regulating antioxidants and DNA methylation', Plant Physiol Biochem., vol. 51, pp. 129-138.
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Larkum, A, Chen, M, Li, Y, Schliep, MT, Trampe, E, West, J, Salih, A & Kuhl, M 2012, 'A novel epiphytic chlorophyll d-containing cyanobacterium isolated from a mangrove-associated red alga', Journal of Phycology, vol. 48, no. 6, pp. 1320-1327.
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Larkum, A, Ross, IL, Kruse, O & Hankamer, B 2012, 'Selection, breeding and engineering of microalgae for bioenergy and biofuel production', Trends In Biotechnology, vol. 30, no. 4, pp. 198-205.
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Lavery, TJ, Roudnew, B, Seymour, JR, Mitchell, JG & Jeffries, TC 2012, 'High nutrient transport and cycling potential revealed in the microbial metagenome of Australian sea lion (Neophoca cinerea) Faeces', PLoS One, vol. 7, no. 5, pp. 1-9.
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Liu, Z, Klatt, CG, Ludwig, M, Rusch, DB, Jensen, SI, Kuhl, M, Ward, DM & Bryant, DA 2012, 'Candidatus Thermochlorobacter aerophilum: an aerobic chlorophotoheterotrophic member of the phylum Chlorobi defined by metagenomics and metatranscriptomics', ISME Journal, vol. 6, pp. 1869-1882.
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Lu, J, Martin, J, Lu, Y, Zhao, J, Yuan, J, Ostrowski, M, Paulsen, I, Piper, JA & Jin, D 2012, 'Resolving Low-Expression Cell Surface Antigens by Time-Gated Orthogonal Scanning Automated Microscopy', ANALYTICAL CHEMISTRY, vol. 84, no. 22, pp. 9674-9678.
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Macreadie, PI, Allen, K, Kelaher, BP, Ralph, PJ & Skilbeck, G 2012, 'Paleoreconstruction of estuarine sediments reveal human-induced weakening of coastal carbon sinks', Global Change Biology, vol. 18, no. 3, pp. 891-901.
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Mansell, PJ, Suggett, DJ & Smith, DJ 2012, 'Management of marine resources; combining industry and research FOREWORD', JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM, vol. 92, no. 4, pp. 643-646.
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Marthews, T, Malhi, Y, Girardin, C, Espejo, J, Aragao, LE, Metcalfe, D, Rapp, J, Mercado, LM, Fisher, R, Galbraith, DR, Fisher, JB, Salinas-Revilla, N, Friend, AD, Restrepo Coupe, N & Williams, R 2012, 'Simulating forest productivity along a neotropical elevational transect: temperature variation and carbon use efficiency', Global Change Biology, vol. 18, no. 9, pp. 2882-2898.
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Mazard, S, Ostrowski, M, Partensky, F & Scanlan, DJ 2012, 'Multi-locus sequence analysis, taxonomic resolution and biogeography of marine Synechococcus', ENVIRONMENTAL MICROBIOLOGY, vol. 14, no. 2, pp. 372-386.
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McCauley, JI 2012, 'Hendrickson Reagent (Triphenylphosphonium Anhydride Trifluoromethane Sulfonate)', SYNLETT, no. 20, pp. 2999-3000.
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McMinn, A, Ashworth, C, Bhagooli, R, Martin, A, Salleh, S, Ralph, PJ & Ryan, KG 2012, 'Antarctic Coastal Microalgal Primary Production And Photosynthesis', Marine Biology, vol. 159, no. 12, pp. 2827-2837.
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Murray, SA, Garby, T, Hoppenrath, M & Neilan, BA 2012, 'Genetic diversity, morphological uniformity and polyketide production in dinoflagellates (Amphidinium, Dinoflagellata)', Plos One, vol. 7, no. 6, pp. e38253-0.
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Murray, SA, Patterson, DJ & Thessen, AE 2012, 'Transcriptomics and microbial eukaryote diversity: a way forward', Trends in Ecology & Evolution, vol. 27, no. 12, pp. 651-652.
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Murray, SA, Wiese, M, Neilan, BA, Orr, RJ, de Salas, M, Brett, S & Hallegraeff, G 2012, 'A reinvestigation of saxitoxin production and sxtA in the 'non-toxic' Alexandrium tamarense Group V clade', Harmful Algae, vol. 18, no. 1, pp. 96-104.
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Nagy, G, Szabo, M, Unnep, R, Kali, G, Miloslavina, Y, Lambrev, PH, Zsiros, O, Porcar, L, Timmins, P, Rosta, L & Garab, G 2012, 'Modulation of the multilamellar membrane organization and of the chiral macrodomains in the diatom Phaeodactylum tricornutum revealed by small-angle neutron scattering and circular dichroism spectroscopy', Photosynthesis Research, vol. 111, no. 1-2, pp. 71-79.
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O'Malley-James, JT, Raven, JA, Cockell, CS & Greaves, JS 2012, 'Life and light: Exotic photosynthesis in binary and multiple-star systems', Astrobiology, vol. 12, no. 2, pp. 115-124.
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Orr, RJ, Murray, SA, Stuken, A, Rhodes, L & Jakobsen, KS 2012, 'When naked became armored: An eight-gene phylogeny reveals monophyletic origin of theca in dinoflagellates', Plos One, vol. 7, no. 11, pp. e50004-0.
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Oxborough, K, Moore, CM, Suggett, DJ, Lawson, T, Chan, HG & Geider, RJ 2012, 'Direct estimation of functional PSII reaction center concentration and PSII electron flux on a volume basis: a new approach to the analysis of Fast Repetition Rate fluorometry (FRRf) data', Limnology and Oceanography: Methods, vol. 10, pp. 142-154.
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Patel, B, Tamburic, B, Zemichael, FW, Dechatiwongse, P & Hellgardt, K 2012, 'Algal Biofuels: A Credible Prospective?', ISRN Renewable Energy, vol. 2012, no. 1, pp. 1-14.
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Pernice, M & Boucher-Rodoni, R 2012, 'Occurrence of a specific dual symbiosis in the excretory organ of geographically distant Nautiloids populations', ENVIRONMENTAL MICROBIOLOGY REPORTS, vol. 4, no. 5, pp. 504-511.
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Pernice, M, Meibom, A, Van Den Heuvel, A, Kopp, C, Domart-Coulon, I, Hoegh-Guldberg, O & Dove, S 2012, 'A single-cell view of ammonium assimilation in coral-dinoflagellate symbiosis', ISME JOURNAL, vol. 6, no. 7, pp. 1314-1324.
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Petrou, K, Kranz, SA, Doblin, MA & Ralph, PJ 2012, 'Photophysiological responses of Fragilariopsis cylindrus (Bacillariophyceae) to nitrogen depletion at two temperatures', Journal of Phycology, vol. 48, no. 1, pp. 127-136.
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Prest, E, Staal, M, Kuhl, M, van Loosdrecht, MC & Vrouwenvelder, J 2012, 'Quantitative measurement and visualization of biofilm O2 consumption rates in membrane filtration systems', Journal Of Membrane Science, vol. 392-393, pp. 66-75.
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Puill-Stephen, E, Willis, BL, Abrego, D, Raina, J & van Oppen, MJ 2012, 'Allorecognition maturation in the broadcast-spawning coral Acropora millepora', Coral Reefs, vol. 31, no. 4, pp. 1019-1028.
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Raven, JA 2012, 'Algal Biogeography: Metagenomics Shows Distribution of a Picoplanktonic Pelagophyte', CURRENT BIOLOGY, vol. 22, no. 17, pp. R682-R683.
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Raven, JA 2012, 'Effects on marine algae of changed seawater chemistry with increasing atmospheric CO2 (vol 111, pg 1, 2011)', BIOLOGY AND ENVIRONMENT-PROCEEDINGS OF THE ROYAL IRISH ACADEMY, vol. 112B, no. 3, pp. 315-315.

Raven, JA & Crawfurd, K 2012, 'Environmental controls on coccolithophore calcification', MARINE ECOLOGY PROGRESS SERIES, vol. 470, pp. 137-166.
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Raven, JA & Hurd, CL 2012, 'Ecophysiology of photosynthesis in macroalgae', PHOTOSYNTHESIS RESEARCH, vol. 113, no. 1-3, pp. 105-125.
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Raven, JA, Giordano, M, Beardall, J & Maberly, SC 2012, 'Algal evolution in relation to atmospheric CO2: carboxylases, carbon-concentrating mechanisms and carbon oxidation cycles', PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, vol. 367, no. 1588, pp. 493-507.
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Ritchie, RJ & Larkum, A 2012, 'Modelling Photosynthesis In Shallow Algal Production Ponds', Photosynthetica, vol. 50, no. 4, pp. 481-500.
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Roudnew, B, Seymour, JR, Jeffries, TC, Lavery, TJ, Smith, RJ & Mitchell, JG 2012, 'Bacterial and virus-like-particle abundances in purged and unpurged groundwater depth profiles', Ground Water Monitoring and Remediation, vol. 32, no. 4, pp. 72-77.
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Seymour, JR, Doblin, MA, Jeffries, TC, Brown, MV, Newton, K, Ralph, PJ, Baird, ME & Mitchell, JG 2012, 'Contrasting microbial assemblages in adjacent water masses associated with the East Australian Current', Environmental Microbiology Reports, vol. 4, pp. 548-555.
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Siboni, N, Abrego, D, Seneca, F, Motti, CA, Andreakis, N, Tebben, J, Blackall, LL & Harder, T 2012, 'Using Bacterial Extract along with Differential Gene Expression in Acropora millepora Larvae to Decouple the Processes of Attachment and Metamorphosis', PLOS ONE, vol. 7, no. 5.
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Siboni, N, Ben-Dov, E, Sivan, A & Kushmaro, A 2012, 'Geographic Specific Coral-Associated Ammonia-Oxidizing Archaea in the Northern Gulf of Eilat (Red Sea)', MICROBIAL ECOLOGY, vol. 64, no. 1, pp. 18-24.
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Sinutok, S, Hill, R, Doblin, MA, Kuhl, M & Ralph, PJ 2012, 'Microenvironmental changes support evidence of photosynthesis and calcification inhibition in Halimeda under ocean acidification and warming', Coral Reefs, vol. 31, pp. 1201-1213.
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Smale, D, Barnes, D, Barnes, R, Smith, D & Suggett, DJ 2012, 'Spatial Variability In The Structure Of Intertidal Crab And Gastropod Assemblages Within The Seychelles Archipelago (indian Ocean)', Journal of Sea Research, vol. 69, pp. 8-15.
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Smith, RJ, Jeffries, TC, Roudnew, B, Fitch, AJ, Seymour, JR, Delpin, MW, Newton, K, Brown, MH & Mitchell, JG 2012, 'Metagenomic comparison of microbial communities inhabiting confined and unconfined aquifer ecosystems', Environmental Microbiology, vol. 14, no. 1 Special Issue, pp. 240-253.
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Smith, SR, Abbriano, RM & Hildebrand, M 2012, 'Comparative analysis of diatom genomes reveals substantial differences in the organization of carbon partitioning pathways', ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS, vol. 1, no. 1, pp. 2-16.
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Stocker, R & Seymour, JR 2012, 'Ecology and physics of bacterial chemotaxis in the ocean', Microbiology and Molecular Biology Reviews, vol. 76, no. 4, pp. 792-812.
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Suggett, DJ, Hall-Spencer, JM, Rodolfo-Metalpa, R, Boatman, TG, Payton, R, Pettay, DT, Johnson, VR, Warner, ME & Lawson, T 2012, 'Sea anemones may thrive in a high CO2 world', Global Change Biology, vol. 18, no. 10, pp. 3015-3025.
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Suggett, DJ, Kikuchi, RK, Oliveira, MD, Spano, S, Carvalho, R & Smith, DJ 2012, 'Photobiology of corals from Brazil's near-shore marginal reefs of Abrolhos', Marine Biology, vol. 159, no. 7, pp. 1461-1473.
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Tamburic, B, Zemichael, FW, Maitland, GC & Hellgardt, K 2012, 'A novel nutrient control method to deprive green algae of sulphur and initiate spontaneous hydrogen production', International Journal of Hydrogen Energy, vol. 37, no. 11, pp. 8988-9001.
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Tamburic, B, Zemichael, FW, Maitland, GC & Hellgardt, K 2012, 'Effect of the light regime and phototrophic conditions on growth of the H2-producing green alga Chlamydomonas reinhardtii', Energy Procedia, vol. 29, pp. 710-719.
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Thessen, AE, Patterson, DJ & Murray, SA 2012, 'The taxonomic significance of species that have only been observed once: The genus Gymnodinium (dinoflagellata) as an example', Plos One, vol. 7, no. 8, pp. e44015-0.
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Veneklaas, EJ, Lambers, H, Bragg, J, Finnegan, PM, Lovelock, CE, Plaxton, WC, Price, CA, Scheible, W-R, Shane, MW, White, PJ & Raven, JA 2012, 'Opportunities for improving phosphorus-use efficiency in crop plants', NEW PHYTOLOGIST, vol. 195, no. 2, pp. 306-320.
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Verhoeven, MP, Kelaher, BP, Bishop, M & Ralph, PJ 2012, 'Epiphyte Grazing Enhances Productivity Of Remnant Seagrass Patches', Austral Ecology, vol. 37, no. 8, pp. 885-892.
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Vrouwenvelder, JS, Prest, EIEC, Kuhl, M, van Loosdrecht, MCM & Staal, M 2012, 'Quantitative measurement and visualization of biofilm O-2 consumption rates inmembrane filtration systems', EUROMEMBRANE CONFERENCE 2012, vol. 44, pp. 233-234.
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Wang, S, Pablo, GP, Ye, J & Huang, D 2012, 'Abundance and diversity of nitrogen-fixing bacteria in rhizosphere and bulk paddy soil under different duration of organic management', WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, vol. 28, no. 2, pp. 493-503.
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Wangpraseurt, D, Larkum, A, Ralph, PJ & Kuhl, M 2012, 'Light gradients and optical microniches in coral tissues', Frontiers in Microbiology, vol. 3, no. 316, pp. 1-9.
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Wilson, KG & Ralph, PJ 2012, 'Laboratory testing protocol for the impact of dispersed petrochemicals on seagrass', Marine Pollution Bulletin, vol. 64, no. 11, pp. 2421-2427.
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Conferences

Ajani, P 2012, 'How green is my ocean? Phytoplankton biodiversity in the coastal waters of New South Wales. Climate Futures Postgraduate Forum 2012, Macquarie University', P.
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Ajani, P 2012, 'Microalgal diversity in the coastal waters of New South Wales (Invited Oral Presentation). UNESCO/Intergovernmental Oceanographic Commissions 10th Advanced Phytoplankton Course: Taxonomy and Systematics 2012, Denmark'.
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Ajani, PA 2012, 'All Things Oysters', Oyster Farmer Workshops, Australia.
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Chartrand, KM, Rasheed, M, Petrou, K & Ralph, PJ 2012, 'Establishing tropical seagrass light requirements in a dynamic port environment', Proceedings of the 12th International Coral Reef Symposium, Cairns, Australia, 9-13 July 2012, International Coral Reef Symposium, ReefBase, Cairns.
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Clementson, L, Gusmao, FM, Oubelkheir, K, ajani, P, Richardson, A & Steven, A 2012, 'Phytoplankton community composition in Moreton Bay after the January 2011 Brisbane floods', Coast to Coasts - Australia's National Coastal Conference 2012, Australia National Coastal Conference, Australian Coastal Councils Association Inc.
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Craggs, R, Park, J, Heubeck, S & Sutherland, D 2012, 'Energy Recovery and Algal Biofuel Production from Wastewater. International symposium on "Microalgal biofuel from wastewater"', International Water Industry Exhibition & Conference, Seoul, Korea.

Craggs, R, Park, J, Heubeck, S & Sutherland, D 2012, 'Wastewater Treatment and Algal Production in High Rate Algal Ponds', Korean Society of Environmental Biology (KoSEB) Conference, KRIBB, Daejeon, Korea,.

Craggs, R, Park, J, Heubeck, S & Sutherland, D 2012, 'Wastewater Treatment and Biofuel Production using Enhanced Anaerobic and Algal Pond Systems', Korean Institute of Energy Research.

Craggs, R, Park, J, Heubeck, S & Sutherland, DL 2012, 'Low Energy Wastewater Treatment and Resource Recovery using Enhanced Pond Systems', Singapore Centre on Life Sciences Engineering (SCELSE), National University of Technology, Singapore.

Hsu, S, Paoletti, C, Torres, M, Ritchie, RJ, Larkum, A & Grillet, C 2012, 'Light transmission of the marine diatom Coscinodiscus wailesii', Proceedings of SPIE vol 8339: Bioinspiration, Biomimetics, and Bioreplication 2012, Bioinspiration, Biomimetics, and Bioreplication 2012, SPIE, San Diego, United States, pp. 1-8.
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Ma, X, Huete, A, Yu, Q, Davies, KP & Restrepo Coupe, N 2012, 'Monitoring spatial patterns of vegetation phenology in an Australian tropical transect using MODIS EVI', International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences, XXII International Society for Photogrammetry & Remote Sensing Congress., ISPRS Society, Melbourne, Australia, pp. 271-276.
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Sutherland, DL 2012, 'Current state of water quality and research in the Upper Waitaki Catchment', Waitaki Workshop.

Sutherland, DL & Craggs, R 1970, 'Algal productivity in wastewater high rate algal ponds', Annual Biological School Conference.

Sutherland, DL, Wells, R & Clayton, J 2012, 'Status of weed growth and potential in the Waitaki Canals and Lakes'.

Reports

Blount, C, Cummings, D, Mayer Pinto, M & Pernice, M 2012, Bimonthly Coral Monitoring Report: Dredging Report 1 − Ichthys Nearshore Environmental Monitoring Program, no. 1, pp. 1-94, Sydney.
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de Winton, M, Clayton, J & Sutherland, DL 2012, Ecological condition of the Ō Tū Wharekai lakes based on LakeSPI, Hamilton, NZ.

Norton, N, Alan, M, Hamilton, D, Meredith, A & Sutherland, DL 2012, Selwyn Waihora Limit Setting Project: predicting consequences of future scenarios for Te Waihora/Lake Ellesmere, Christchurch, NZ.

Sutherland, D 2012, Effects of Meridian hydro-power operations on water quality in the Waitaki Catchment, Christchurch.

Sutherland, D & Taumoepaeu, A 2012, Macrophyte monitoring of Waituna Lagoon – results of the December 2011 and February 2012 surveys, Christchurch.

Sutherland, D, Champion, P & Edwards, T 2012, The ecological condition of 6 Upper Waitaki lakes and Lake Tennyson using LakeSPI, and aquatic weed surveillance surveys for 11 Canterbury lakes, Christchurch.

Sutherland, D, Champion, P, Wells, R & Kelly, G 2012, Manapouri Power Scheme - 5 yearly consent monitoring – Macrophytes, Christchurch.

Sutherland, D, Kelly, G, McDermott, H & Hawke, L 2012, Upper Waitaki Interim Water Quality Monitoring Data December 2011 to April 2012, Christchurch.

Sutherland, D, Molineux, M & Inder, F 2012, Water quality monitoring in the Waiau Arm of Lake Manapouri - November 2011 to March 2012, Christchurch.

Sutherland, DL 2012, Water Quality in the Upper Waitaki Catchment - current state and potential impacts of increased nutrient concentrations as a result of land use intensification, Christchurch, NZ.

Wells, R, Clayton, J & Sutherland, DL 2012, Waitaki lakes weed potential - implications for power generation, Hamilton, NZ.

Other

Sutherland, D, Wells, R & Clayton, J 2012, 'Status of weed growth and potential in the Waitaki Canals and Lakes. Presentation at Meridian workshop on weed management'.