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Publications

Chapters

Douglas, SE, Raven, JA & Larkum, AWD 2003, 'The Algae and their General Characteristics' in Photosynthesis in Algae, Springer Netherlands, pp. 1-10.
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Franklin, LA, Osmond, CB & Larkum, AWD 2003, 'Photoinhibition, UV-B and Algal Photosynthesis' in Photosynthesis in Algae, Springer Netherlands, pp. 351-384.
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Kuhl, M, Fenchel, T & Kazmierczak, J 2003, 'Growth, structure and calcification potential of an artificial cyanobacterial mat' in Krumbein, WE, Paterson, D & Zavarzin, G (eds), Fossil and recent biofilms, a natural history of life on planet Earth, Kluwer Academic Publishers, Dordrecht, pp. 77-102.

Larkum, AWD 2003, 'Light-Harvesting Systems in Algae' in Photosynthesis in Algae, Springer Netherlands, pp. 277-304.
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Larkum, AWD & Vesk, M 2003, 'Algal Plastids: Their Fine Structure and Properties' in Photosynthesis in Algae, Springer Netherlands, pp. 11-28.
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Journal articles

Belli, SI, Monnerat, S, Schaff, C, Masina, S, Noll, T, Myler, PJ, Stuart, K & Fasel, N 2003, 'Sense and antisense transcripts in the histone (HIS-1) locus of Leishmania major', International Journal of Parasitology, vol. 33, pp. 965-975.
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Belli, SI, Wallach, M & Smith, NC 2003, 'Cloning and characterization of the 82 kDa tyrosine-rich sexual stage glycoprotein, GAM82, and its role in oocyst wall formation in the apicomplexan parasite, Eimeria maxima', Gene, vol. 307, pp. 201-212.
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Belli, SI, Wallach, M, Luxford, C, Davies, MJ & Smith, NC 2003, 'Roles of tyrosine-rich precursor glycoproteins and dityrosine- and 3,4-dihydroxyphenylalanine-mediated protein cross-linking in development of the oocyst wall in the coccidian parasite Eimeria maxima', Eukaryotic Cell, vol. 2, no. 3, pp. 456-464.
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Bibby, TS, Nield, J, Chen, M, Larkum, AWD & Barber, J 2003, 'Structure of a photosystem II supercomplex isolated from Prochloron didemni retaining its chlorophyll a/b light-harvesting system', Proceedings of the National Academy of Sciences of the United States of America, vol. 100, no. 15, pp. 9050-9054.
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Choinski, JS, Ralph, PJ & Eamus, D 2003, 'Changes in photosynthesis during leaf expansion in Corymbia gummifera', Australian Journal Of Botany, vol. 51, no. 1, pp. 111-118.
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Davey, MS, Suggett, DJ, Geider, RJ & Taylor, AR 2003, 'Phytoplankton plasma membrane redox activity: Effect of iron limitation and interaction with photosynthesis', Journal Of Phycology, vol. 39, no. 6, pp. 1132-1144.
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Dufresne, A, Salanoubat, M, Partensky, F, Artiguenave, F, Axmann, IM, Barbe, V, Duprat, S, Galperin, MY, Koonin, EV, Le Gall, F, Makarova, KS, Ostrowski, M, Oztas, S, Robert, C, Rogozin, IB, Scanlan, DJ, de Marsac, NT, Weissenbach, J, Wincker, P, Wolf, YI & Hess, WR 2003, 'Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome', PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, vol. 100, no. 17, pp. 10020-10025.
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Ferguson, DJ, Belli, SI, Smith, NC & Wallach, M 2003, 'The development of the macrogamete and oocyst wall in Eimeria maxima: immuno-light and electron microscopy', International Journal For Parasitology, vol. 33, no. 12, pp. 1329-1340.
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Ferris, MJ, Kuhl, M, Wieland, A & Ward, DM 2003, 'Cyanobacterial Ecotypes in Different Optical Microenvironments of a 68 degrees C Hot Spring Mat Community Revealed by 16S-23S rRNA Internal Transcribed Spacer Region Variation', Applied and Environmental Microbiology, vol. 69, no. 5, pp. 2893-2898.
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Ferris, MJ, Magnuson, TS, Fagg, JA, Thar, R, Kuhl, M, Sheehan, KB & Henson, JM 2003, 'Microbially mediated sulphide production in a thermal, acidic algal mat community in Yellowstone National Park', Environmental Microbiology, vol. 5, no. 10, pp. 954-960.
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Gilmore, AM, Larkum, AWD, Salih, A, Itoh, S, Shibata, Y, Bena, C, Yamasaki, H, Papina, M & Van Woesik, R 2003, 'Simultaneous Time Resolution of the Emission Spectra of Fluorescent Proteins and Zooxanthellar Chlorophyll in Reef-building Corals', Photochemistry and Photobiology, vol. 77, no. 5, pp. 515-523.
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Hawes, I, Riis, T, Sutherland, D & Flanagan, M 2003, 'Physical constraints to aquatic plant growth in New Zealand lakes', JOURNAL OF AQUATIC PLANT MANAGEMENT, vol. 41, pp. 44-52.

Hawes, I, Sutherland, D & Hanelt, D 2003, 'The use of pulse amplitude modulated fluorometry to determine fine-scale temporal and spatial variation of in situ photosynthetic activity within an Isoetes-dominated canopy', AQUATIC BOTANY, vol. 77, no. 1, pp. 1-15.
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Helfrich, M, Bommer, B, Oster, U, Klement, H, Mayer, K, Larkum, AWD & Rüdiger, W 2003, 'Chlorophylls of the c family: Absolute configuration and inhibition of NADPH:protochlorophyllide oxidoreductase', Biochimica et Biophysica Acta - Bioenergetics, vol. 1605, no. 1-3, pp. 97-103.
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Hohnberg, D, Ralph, PJ & Jones, H 2003, 'Toxicity of the herbicide atrazine at environmental concentrations to Vallisneria Gigantea, assessed using chlorophyll fluorescence', Australasian Journal of Ecotoxicology, vol. 9, pp. 93-100.
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Jermiin, LS, Ho, SYW, Ababneh, F, Robinson, J & Larkum, AWD 2003, 'Hetero: a program to simulate the evolution of DNA on a four-taxon tree.', Applied bioinformatics, vol. 2, no. 3, pp. 159-163.
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Larkum, A, Koch, EW & Kuhl, M 2003, 'Diffusive boundary layers and photosynthesis of the epilithic algal community of coral reefs', Marine Biology, vol. 142, no. 5, pp. 1073-1082.
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Larkum, AWD 2003, 'Contributions of henrik lundegårdh.', Photosynthesis research, vol. 76, no. 1-3, pp. 105-110.
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Larkum, AWD, Koch, EMW & Kuhl, M 2003, 'Diffusive boundary layers and photosynthesis of the epilithic algal community of coral reefs', MARINE BIOLOGY, vol. 142, no. 6, pp. 1073-1082.
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Lenzen, M, Murray, SA, Korte, B & Dey, CJ 2003, 'Environmental impact assessment including indirect effects - a case study using input - output analysis', Environmental Impact Assessment Review, vol. 23, pp. 263-282.

Macinnis-Ng, CM & Ralph, PJ 2003, 'In situ impact of petrochemicals on the photosynthesis of the seagrass Zostera capricorni', Marine Pollution Bulletin, vol. 46, no. 11, pp. 1395-1407.
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Macinnis-Ng, CM & Ralph, PJ 2003, 'Short-term response and recovery of Zostera capricorni photosynthesis after herbicide exposure', Aquatic Botany, vol. 76, no. 1, pp. 1-15.
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Mi, D, Chen, M, Lin, S, Lince, M, Larkum, AWD & Blankenship, RE 2003, 'Excitation dynamics in the core antenna in the photosystem I reaction center of the chlorophyll d-containing photosynthetic prokaryote acaryochloris marina', Journal of Physical Chemistry B, vol. 107, no. 6, pp. 1452-1457.
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Mitakakis, T, O'meara, T & Tovey, E 2003, 'The effect of sunlight on allergen release from spores of the fungus Alternaria', Grana, vol. 42, no. 1, pp. 43-46.
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Moore, CM, Suggett, DJ, Holligan, PM, Sharples, J, Abraham, ER, Lucas, MI, Rippeth, T, Fisher, NR, Simpson, JH & Hydes, D 2003, 'Physical controls on phytoplankton physiology and production at a shelf sea front: a fast repetition-rate fluorometer based field study', Marine Ecology Progress Series, vol. 259, pp. 29-45.
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Mountfort, DO, Kaspar, HF, Asher, RA & Sutherland, D 2003, 'Influences of pond geochemistry, temperature, and freeze-thaw on terminal anaerobic processes occurring in sediments of six ponds of the McMurdo Ice Shelf, near Bratina Island, Antarctica', APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol. 69, no. 1, pp. 583-592.
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Nieuwenburg, P, Clarke, R, Cai, Z, Chen, M, Larkum, A, Cabral, N, Ghiggino, K & Reimers, JR 2003, 'Examination Of The Photophysical Processes Of Chlorophyll D Leading To A Clarification Of Proposed Uphill Energy Transfer Processes In Cells Of Acaryochloris Marina', Photochemistry And Photobiology, vol. 77, no. 6, pp. 628-637.
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Pritchard, TR, Lee, RS, Ajani, PA, Rendell, PS, Black, K & Koop, K 2003, 'Phytoplankton responses to nutrient sources in coastal waters off southeastern Australia', Aquatic Ecosystem Health and Management, vol. 6, no. 2 SPEC. ISS., pp. 105-117.
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Purkerson, DG, Doblin, MA, Bollens, SM, Luoma, SN & Cutter, GA 2003, 'Selenium in San Francisco Bay zooplankton: Potential effects of hydrodynamics and food web interactions', Estuaries, vol. 26, no. 4A, pp. 956-969.
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Runcie, JW, Ritchie, RJ & Larkum, AWD 2003, 'Uptake kinetics and assimilation of inorganic nitrogen by Catenella nipae and Ulva lactuca', Aquatic Botany, vol. 76, no. 2, pp. 155-174.
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Stopar, D, Cerne, A, Zigman, M, Poljsak-Prijatelj, M & Turk, V 2003, 'Viral abundance and a high proportion of lysogens suggest that viruses are important members of the microbial community in the Gulf of Trieste', MICROBIAL ECOLOGY, vol. 46, no. 2, pp. 249-256.
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Suggett, DJ, Oxborough, K, Baker, N, Macintyre, H, Kana, T & Geider, R 2003, 'Fast Repetition Rate And Pulse Amplitude Modulation Chlorophyll A Fluorescence Measurements For Assessment Of Photosynthetic Electron Transport In Marine Phytoplankton', European Journal Of Phycology, vol. 38, no. 4, pp. 371-384.
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Thar, R & Kuhl, M 2003, 'Bacteria are not too small for spatial sensing of chemical gradients: An experimental evidence', Proceedings of the National Academy of Sciences, vol. 100, no. 10, pp. 5748-5753.
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Waters, RL, Mitchell, JG & Seymour, JR 2003, 'Geostatistical characterisation of centimetre-scale spatial structure of in vivo fluorescence', Marine Ecology Progress Series, vol. 251.

Wieland, A, Kuhl, M, McGowan, L, Fourcans, A, Duran, R, Caumette, P, de Oteyza, TG, Grimalt, JO, Sole, A, Diestra, E, Esteve, I & Herbert, RA 2003, 'Microbial mats on the Orkney Islands revisited: Microenvironment and microbial community composition', Microbial Ecology, vol. 46, pp. 371-390.
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Witcombe, DM, Belli, SI, Wallach, M & Smith, NC 2003, 'Molecular characterisation of EmTFP250: a novel member of the TRAP protein family in Eimeria maxima', International Journal For Parasitology, vol. 33, no. 7, pp. 691-702.
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Conferences

Masojidek, J, Papacek, S, Sergejevova, M, Jirka, V, Cerveny, J, Kunc, J, Korecko, J, Verbovikova, O, Kopecky, J, Stys, D & Torzillo, G 2002, 'A closed solar photobioreactor for cultivation of microalgae under supra-high irradiance: basic design and performance', JOURNAL OF APPLIED PHYCOLOGY, 9th International Conference on Applied Algology, KLUWER ACADEMIC PUBL, AGUADULCE, SPAIN, pp. 239-248.
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Salih, A, Cox, G & Larkum, AW 2003, 'Cellular organization & spectral diversity of GFP-like proteins in live coral cells studied by single & multi-photon imaging & microspectroscopy', Proceedings of SPIE - The International Society for Optical Engineering, pp. 194-200.
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