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Publications

Books

Labbate, M, Seymour, JR, Lauro, F & Brown, MV 2016, Anthropogenic Impacts on the Microbial Ecology and Function of Aquatic Environments, Frontiers Media SA, Lausanne, Switzerland.
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Chapters

Červený, J, Zavřel, T, Chmelík, D, Búzová, D, Fedorko, J, Literáková, P, Sukačová, K, Segecova, A & Roitsch, T 2016, 'Microalgal adaptive biotechnologies for a sustainable future' in Vačkář, D & Janouš, D (eds), Global Change & Ecosystems, Global Change Research Institute, Czech Academy of Sciences, pp. 148-160.

Commault, A & Weld, RJ 2016, 'Whole-cell Biosensors for Monitoring Bioremediation' in Lear, G (ed), Biofilms in Bioremediation, Caister Academic Press, Norfolk, United Kingdom, pp. 75-91.
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Huete, A, Ponce-Campos, G, Zhang, Y, Restrepo-Coupe, N, Ma, X & Moran, MS 2016, 'Monitoring Photosynthesis from Space' in Thenkabail, P (ed), Land Resources Monitoring, Modeling, and Mapping with Remote Sensing, CRC Press, Boca Raton, pp. 3-22.
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Ralph, PJ, Hill, R, Doblin, MA & Davy, SK 2016, 'Theory and Application of Pulse Amplitude Modulated Chlorophyll Fluorometry in Coral Health Assessment' in Woodley, CM, Downs, CA, Bruckner, AW, Porter, JW & Galloway, SB (eds), Diseases of Coral, John Wiley & Sons, Hoboken, New Jersey, pp. 506-523.
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Journal articles

Ajani, PA, Armbrecht, L, Oliver, K, Kohli, G & Murray, S 2016, 'Diversity, temporal distribution and physiology of the centric diatom Leptocylindrus (Bacillariophyta) from a southern hemisphere upwelling system', Diatom Research.
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Ajani, PA, Hallegraeff, GM, Allen, D, Coughlan, A, Richardson, AJ, Armand, LK, Ingleton, T & Murray, SA 2016, 'Establishing baselines: a review of eighty years of phytoplankton diversity and biomass in southeastern Australia', Oceanography and Marine Biology: an annual review, vol. 54, pp. 387-412.
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Ajani, PA, Hallegraeff, GM, Allen, D, Coughlan, A, Richardson, AJ, Armand, LK, Ingleton, T & Murray, SA 2016, 'Establishing baselines: Eighty years of phytoplankton diversity and biomass in south-eastern Australia', vol. 54, pp. 387-412.
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Ajani, PA, Kim, JH, Han, MS & Murray, SA 2016, 'The first report of the potentially harmful diatom Pseudo-nitzschia caciantha from Australian coastal waters.', Phycological Research, vol. 64, no. 4, pp. 312-317.
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Ajani, PA, Larsson, M, Rubio, A, Bush, S, Brett, S & Farrell, H 2016, 'Modelling bloom formation of the toxic dinoflagellates Dinophysis acuminata and Dinophysis caudata in a highly modified estuary, south eastern Australia', Estuarine, Coastal and Shelf Science, vol. 183, pp. 95-106.
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Argyle, PA, Harwood, DT, Rhodes, LL, Champeau, O & Tremblay, LA 2016, 'Toxicity assessment of New Zealand and Pacific dinoflagellates Ostreopsis and Gambierdiscus (Dinophyceae) extracts using bioassays', New Zealand Journal of Marine and Freshwater Research, vol. 50, no. 3, pp. 444-456.
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Ashworth, J, Turkarsian, S, Harris, M, Orellana, MV & Baliga, NS 2016, 'Pan-transcriptomic analysis identifies coordinated and orthologous functional modules in the diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum', MARINE GENOMICS, vol. 26, pp. 21-28.
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Baird, ME, Adams, MP, Babcock, RC, Oubelkheir, K, Mongin, M, Wild-Allen, KA, Skerratt, J, Robson, BJ, Petrou, K, Ralph, PJ, O'Brien, KR, Carter, AB, Jarvis, JC & Rasheed, MA 2016, 'A biophysical representation of seagrass growth for application in a complex shallow-water biogeochemical model', ECOLOGICAL MODELLING, vol. 325, pp. 13-27.
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Baird, ME, Cherukuru, N, Jones, E, Margvelashvili, N, Mongin, M, Oubelkheir, K, Ralph, PJ, Rizwi, F, Robson, BJ, Schroeder, T, Skerratt, J, Steven, ADL & Wild-Allen, KA 2016, 'Remote-sensing reflectance and true colour produced by a coupled hydrodynamic, optical, sediment, biogeochemical model of the Great Barrier Reef, Australia: Comparison with satellite data', ENVIRONMENTAL MODELLING & SOFTWARE, vol. 78, pp. 79-96.
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Baker, KG, Robinson, CM, Radford, DT, McInnes, AS, Evenhuis, C & Doblin, MA 2016, 'Thermal performance curves of functional traits aid understanding of thermally induced changes in diatom-mediated biogeochemical fluxes', Frontiers in Marine Science, vol. 3, pp. 1-14.
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Beld, J, Abbriano, R, Finzel, K, Hildebrand, M & Burkart, MD 2016, 'Probing fatty acid metabolism in bacteria, cyanobacteria, green microalgae and diatoms with natural and unnatural fatty acids', MOLECULAR BIOSYSTEMS, vol. 12, no. 4, pp. 1299-1312.
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Beringer, J, Hutley, LB, McHugh, I, Arndt, SK, Campbell, D, Cleugh, HA, Cleverly, J, Resco de Dios, V, Eamus, D, Evans, B, Ewenz, C, Grace, P, Griebel, A, Haverd, V, Hinko-Najera, N, Huete, A, Isaac, P, Kanniah, K, Leuning, R, Liddell, MJ, Macfarlane, C, Meyer, W, Moore, C, Pendall, E, Phillips, A, Phillips, RL, Prober, S, Restrepo-Coupe, N, Rutledge, S, Schroder, I, Silberstein, R, Southall, P, Sun, M, Tapper, NJ, van Gorsel, E, Vote, C, Walker, J & Wardlaw, T 2016, 'An introduction to the Australian and New Zealand flux tower network & OzFlux', Biogeosciences Discussions, vol. 13, pp. 5895-5916.
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Beringer, J, Hutley, LB, McHugh, I, Arndt, SK, Campbell, D, Cleugh, HA, Cleverly, J, Resco de Dios, V, Eamus, D, Evans, B, Ewenz, C, Grace, P, Griebel, A, Haverd, V, Hinko-Najera, N, Huete, A, Isaac, P, Kanniah, K, Leuning, R, Liddell, MJ, Macfarlane, C, Meyer, W, Moore, C, Pendall, E, Phillips, A, Phillips, RL, Prober, SM, Restrepo-Coupe, N, Rutledge, S, Schroder, I, Silberstein, R, Southall, R, Yee, MS, van Gorsel, E, Vote, C, Walker, J & Wardlaw, T 2016, 'An introduction to the Australian and New Zealand flux tower network – OzFlux', Biogeosciences, vol. 13, pp. 5895-5916.
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Bibiloni-Isaksson, J, Seymour, JR, Ingleton, T, van de Kamp, J, Bodrossy, L & Brown, MV 2016, 'Spatial and temporal variability of aerobic anoxygenic photoheterotrophic bacteria along the east coast of Australia', ENVIRONMENTAL MICROBIOLOGY, vol. 18, no. 12, pp. 4485-4500.
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Camp, EF, Hobbs, J-PA, De Brauwer, M, Dumbrell, AJ & Smith, DJ 2016, 'Cohabitation promotes high diversity of clownfishes in the Coral Triangle', PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, vol. 283, no. 1827.
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Camp, EF, Smith, DJ, Evenhuis, C, Enochs, I, Manzello, D, Woodcock, S & Suggett, DJ 2016, 'Acclimatization to high-variance habitats does not enhance physiological tolerance of two key Caribbean corals to future temperature and pH', PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, vol. 283, no. 1831.
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Camp, EF, Suggett, DJ, Gendron, G, Jompa, J, Manfrino, C & Smith, DJ 2016, 'Mangrove and Seagrass Beds Provide Different Biogeochemical Services for Corals Threatened by Climate Change', Frontiers in Marine Science, vol. 3, pp. 1-16.
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Carney, RL, Seymour, JR, Westhorpe, D & Mitrovic, SM 2016, 'Lotic bacterioplankton and phytoplankton community changes under dissolved organic-carbon amendment: evidence for competition for nutrients', MARINE AND FRESHWATER RESEARCH, vol. 67, no. 9, pp. 1362-1373.
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Cartaxana, P, Cruz, S, Gameiro, C & Kuhl, M 2016, 'Regulation of Intertidal Microphytobenthos Photosynthesis Over a Diel Emersion Period Is Strongly Affected by Diatom Migration Patterns', FRONTIERS IN MICROBIOLOGY, vol. 7.
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Cartaxana, P, Ribeiro, L, Gössling, J, Cruz, S & Kuhl, M 2016, 'Light and O2 microenvironments in two contrasting diatom-dominated coastal sediments.', Marine Ecology Progress Series, vol. 545, pp. 35-47.
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Chan, N, Wangpraseurt, D, Kuhl, M & Conolly, S 2016, 'Flow and coral morphology control coral surface pH: Implications for the effects of ocean acidification.', Frontiers in Marine Science, vol. 3, no. 10.
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Chartrand, KM, Bryant, CV, Carter, AB, Ralph, PJ & Rasheed, MA 2016, 'Light thresholds to prevent dredging impacts on the great barrier reef seagrass, Zostera muelleri ssp. capricorni', Frontiers in Marine Science, vol. 3, pp. 1-17.
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Cherukuru, N, Davies, PL, Brando, VE, Anstee, JM, Baird, ME, Clementson, LA & Doblin, MA 2016, 'Physical oceanographic processes influence bio-optical properties in the Tasman Sea', JOURNAL OF SEA RESEARCH, vol. 110, pp. 1-7.
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Chowdhury, PR, DeMaere, M, Chapman, T, Worden, P, Charles, IG, Darling, AE & Djordjevic, SP 2016, 'Comparative genomic analysis of toxin-negative strains of Clostridium difficile from humans and animals with symptoms of gastrointestinal disease', BMC MICROBIOLOGY, vol. 16.
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Cleverly, J, Eamus, D, Luo, Q, Coupe, NR, Kljun, N, Ma, X, Ewenz, C, Li, L, Yu, Q & Huete, A 2016, 'The importance of interacting climate modes on Australia's contribution to global carbon cycle extremes', SCIENTIFIC REPORTS, vol. 6.
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Cleverly, J, Eamus, D, Restrepo Coupe, N, Chen, C, Maes, W, Li, L, Faux, R, Santini, NS, Rumman, R, Yu, Q & Huete, A 2016, 'Soil moisture controls on phenology and productivity in a semi-arid critical zone', Science of the Total Environment.
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Cleverly, J, Eamus, D, Van Gorsel, E, Chen, C, Rumman, R, Luo, Q, Coupe, NR, Li, L, Kljun, N, Faux, R, Yu, Q & Huete, A 2016, 'Productivity and evapotranspiration of two contrasting semiarid ecosystems following the 2011 global carbon land sink anomaly', AGRICULTURAL AND FOREST METEOROLOGY, vol. 220, pp. 151-159.
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Commault, A, Lear, G, Bouvier, S, Feiler, L, Karacs, J & Weld, R 2016, 'Geobacter-dominated biofilms used as amperometric BOD sensors', Biochemical Engineering Journal, vol. 109, pp. 88-95.
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Cruz, JA, Savage, LJ, Zegarac, R, Hall, CC, Satoh-Cruz, M, Davis, GA, Kovac, WK, Chen, J & Kramer, DM 2016, 'Dynamic Environmental Photosynthetic Imaging Reveals Emergent Phenotypes', CELL SYSTEMS, vol. 2, no. 6, pp. 365-377.
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Davey, PA, Pernice, M, Sablok, G, Larkum, A, Lee, HT, Golicz, A, Edwards, D, Dolferus, R & Ralph, P 2016, 'The emergence of molecular profiling and omics techniques in seagrass biology; furthering our understanding of seagrasses.', Functional & Integrative Genomics, vol. 16, no. 5, pp. 465-480.
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Davies, CH, Coughlan, A, Hallegraeff, G, Ajani, P, Armbrecht, L, Atkins, N, Bonham, P, Brett, S, Brinkman, R, Burford, M, Clementson, L, Coad, P, Coman, F, Davies, D, Dela-Cruz, J, Devlin, M, Edgar, S, Eriksen, R, Furnas, M, Hassler, C, Hill, D, Holmes, M, Ingleton, T, Jameson, I, Leterme, SC, Lonborg, C, McLaughlin, J, McEnnulty, F, McKinnon, AD, Miller, M, Murray, S, Nayar, S, Patten, R, Pritchard, T, Proctor, R, Purcell-Meyerink, D, Raes, E, Rissik, D, Ruszczyk, J, Slotwinski, A, Swadling, KM, Tattersall, K, Thompson, P, Thomson, P, Tonks, M, Trull, TW, Uribe-Palomino, J, Waite, AM, Yauwenas, R, Zammit, A & Richardson, AJ 2016, 'A database of marine phytoplankton abundance, biomass and species composition in Australian waters', SCIENTIFIC DATA, vol. 3.
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de Brauwer, M, Camp, E, Jompa, J & Smith, DJ 2016, 'High levels of heterospecific cohabitation among anemonefishes in Hoga Island, Indonesia', Marine Biodiversity, vol. 46, no. 1, pp. 19-20.
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Doblin, MA & van Sebille, E 2016, 'Drift in ocean currents impacts intergenerational microbial exposure to temperature', Proceedings of the National Academy of Sciences of USA, vol. 113, no. 20, pp. 5700-7505.
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Doblin, MA, Petrou, K, Sinutok, S, Seymour, JR, Messer, LF, Brown, MV, Norman, L, Everett, JD, McInnes, AS, Ralph, PJ, Thompson, PA & Hassler, CS 2016, 'Nutrient uplift in a cyclonic eddy increases diversity, primary productivity and iron demand of microbial communities relative to a western boundary current', PEERJ, vol. 4.
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Elgetti Brodersen, K, Koren, K, Lichtenberg, M & Kühl, M 2016, 'Nanoparticle-based measurements of pH and O2 dynamics in the rhizosphere of Zostera marina L.: effects of temperature elevation and light-dark transitions.', Plant, Cell and Environment, vol. 39, no. 7, pp. 1619-1630.
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Farrant, GK, Dore, H, Cornejo-Castillo, FM, Partensky, F, Ratin, M, Ostrowski, M, Pitt, FD, Wincker, P, Scanlan, DJ, Iudicone, D, Acinas, SG & Garczarek, L 2016, 'Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria', PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, vol. 113, no. 24, pp. E3365-E3374.
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Farrell, H, O'Connor, W, Seebacher, F, Harwood, DT & Murray, S 2016, 'Molecular Detection Of The Sxta Gene From Saxitoxin-Producing Alexandrium Minutum In Commercial Oyster', The Journal of Shellfish Research, vol. 35, no. 1, pp. 169-177.
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Farrell, H, Zammit, A, Manning, J, Shadbolt, C, Szabo, L, Harwood, DT, McNabb, P, Turahui, JA & van den Berg, DJ 2016, 'Clinical diagnosis and chemical confirmation of ciguatera fish poisoning in New South Wales, Australia.', Communicable diseases intelligence quarterly report, vol. 40, no. 1, pp. E1-E6.
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Flynn, T, Signal, B, Johnson, SL & Gemmell, NJ 2016, 'Mitochondrial genome diversity among six laboratory zebrafish (Danio rerio) strains', Mitochondrial DNA Part A, vol. 27, pp. 4364-4371.

Flynn, T, Signal, B, Johnson, SL & Gemmell, NJ 2016, 'Mitochondrial genome diversity among six laboratory zebrafish (Danio rerio) strains', MITOCHONDRIAL DNA PART A, vol. 27, no. 6, pp. 4364-4371.
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Gardner, SG, Nielsen, DA, Laczka, O, Shimmon, R, Beltran, VH, Ralph, PJ & Petrou, K 2016, 'Dimethylsulfoniopropionate, superoxide dismutase and glutathione as stress response indicators in three corals under short-term hyposalinity stress', PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, vol. 283, no. 1824.
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Garren, M, Son, K, Tout, J, Seymour, JR & Stocker, R 2016, 'Temperature-induced behavioral switches in a bacterial coral pathogen.', The ISME journal, vol. 10, pp. 1363-1372.
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Glibert, PM, Wilkerson, FP, Dugdale, RC, Raven, JA, Dupont, CL, Leavitt, PR, Parker, AE, Burkholder, JM & Kana, T 2016, 'Pluses and minuses of ammonium and nitrate uptake and assimilation by phytoplankton and implications for productivity and community composition, with emphasis on nitrogen-enriched conditions', Limnology and Oceanography, vol. 61, pp. 165-197.
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Gloss, BS, Signal, B, Cheetham, SW, Gruhl, F, Kaczorowski, D, Perkins, AC & Dinger, ME 2016, 'High temporal resolution of gene expression dynamics in developing mouse embryonic stem cells', bioRxiv, pp. 084442-084442.

Goessling, J, Cartaxana, P & Kuhl, M 2016, 'Photo-protection in the centric diatom Coscinodiscus granii is not controlled by chloroplast high-light avoidance movement', Frontiers in Marine Science, vol. 2, pp. 1-10.
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Hansen, PJ, Ojamae, K, Berge, T, Trampe, ECL, Nielsen, LT, Lips, I & Kuhl, M 2016, 'Photoregulation in a Kleptochloroplastidic Dinoflagellate, Dinophysis acuta', FRONTIERS IN MICROBIOLOGY, vol. 7.
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Hassan, KA, Cain, AK, Huang, T, Liu, Q, Elbourne, LDH, Boinett, CJ, Brzoska, AJ, Li, L, Ostrowski, M, Nguyen, TKN, Tran, DHN, Baker, S, Parkhill, J & Paulsen, IT 2016, 'Fluorescence-Based Flow Sorting in Parallel with Transposon Insertion Site Sequencing Identifies Multidrug Efflux Systems in Acinetobacter baumannii', MBIO, vol. 7, no. 5.
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Hopkins, FE, Bell, TG, Yang, M, Suggett, DJ & Steinke, M 2016, 'Air exposure of coral is a significant source of dimethylsulfide (DMS) to the atmosphere', SCIENTIFIC REPORTS, vol. 6.
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Jeffries, TC, Curlevski, NJ, Brown, MV, Harrison, DP, Doblin, MA, Petrou, K, Ralph, PJ & Seymour, JR 2016, 'Partitioning of fungal assemblages across different marine habitats', ENVIRONMENTAL MICROBIOLOGY REPORTS, vol. 8, no. 2, pp. 235-238.
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Jeffries, TC, Schmitz Fontes, ML, Harrison, DP, Van-Dongen-Vogels, V, Eyre, BD, Ralph, PJ & Seymour, JR 2016, 'Bacterioplankton Dynamics within a Large Anthropogenically Impacted Urban Estuary.', Frontiers in Microbiology, vol. 6, pp. 1-17.
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Jin, YK, Lundgren, P, Lutz, A, Raina, JB, Howell, EJ, Paley, AS, Willis, BL & van Oppen, MJH 2016, 'Genetic markers for antioxidant capacity in a reef-building coral', Science Advances, vol. 2, no. 5.
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Kahlke, T & Umbers, KDL 2016, 'Bioluminescence', CURRENT BIOLOGY, vol. 26, no. 8, pp. R313-R314.
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Kelleway, JJ, Saintilan, N, Macreadie, PI & Ralph, PJ 2016, 'Sedimentary Factors are Key Predictors of Carbon Storage in SE Australian Saltmarshes', ECOSYSTEMS, vol. 19, no. 5, pp. 865-880.
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Kelleway, JJ, Saintilan, N, Macreadie, PI, Skilbeck, CG, Zawadzki, A & Ralph, PJ 2016, 'Seventy years of continuous encroachment substantially increases "blue carbon' capacity as mangroves replace intertidal salt marshes', GLOBAL CHANGE BIOLOGY, vol. 22, no. 3, pp. 1097-1109.
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Kim, J, Fabris, M, Baart, G, Kim, MK, Goossens, A, Vyverman, W, Falkowski, P & Lun, DS 2016, 'Flux balance analysis of primary metabolism in the diatom Phaeodactylum tricornutum', The Plant Journal, vol. 85, no. 1, pp. 161-176.
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Klotz, M, Bryant, D, Frederickson, J, Inskeep, W & Kuhl 2016, 'Editorial: Systems biology and ecology of microbial mat communities.', Frontiers in Microbiology, vol. 7, no. 115.
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Kohli, GS, John, U, Van Dolah, FM & Murray, SA 2016, 'Evolutionary distinctiveness of fatty acid and polyketide synthesis in eukaryotes', ISME JOURNAL, vol. 10, no. 8, pp. 1877-1890.
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Kolpen, M, Lerche, CJ, Sams, T, Bjarnsholt, T, Ciofu, O, Kuhl, M, Hoiby, N & Jensen, P 2016, 'Enhanced killing of hypoxic p. Aeruginosa biofilm by ciprofloxacin with hyperbaric oxygen treatment', Pediatric Pulmonology, vol. 51, pp. 331-332.

Kolpen, M, Mousavi, N, Sams, T, Bjarnsholt, T, Ciofu, O, Moser, C, Kuhl, M, Hoiby, N & Jensen, PO 2016, 'Reinforcement of the bactericidal effect of ciprofloxacin on Pseudomonas aeruginosa biofilm by hyperbaric oxygen treatment', INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, vol. 47, no. 2, pp. 163-167.
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Koren, K, Jakobsen, SL & Kuhl, M 2016, 'In-vivo imaging of O-2 dynamics on coral surfaces spray-painted with sensor nanoparticles', SENSORS AND ACTUATORS B-CHEMICAL, vol. 237, pp. 1095-1101.
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Koren, K, Jensen, PO & Kuhl, M 2016, 'Development of a rechargeable optical hydrogen peroxide sensor - sensor design and biological application', ANALYST, vol. 141, no. 14, pp. 4332-4339.
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Koyyalamudi, SR, Kuzhiumparambil, U, Nath, CE, Byrne, JA, Fraser, CJ, O'Brien, TA, Earl, JW & Shaw, PJ 2016, 'Development and Validation of a High Pressure Liquid Chromatography-UV Method for the Determination of Treosulfan and Its Epoxy Metabolites in Human Plasma and Its Application in Pharmacokinetic Studies', JOURNAL OF CHROMATOGRAPHIC SCIENCE, vol. 54, no. 3, pp. 326-333.
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Kumar, M, Kuzhiumparambil, U, Pernice, M, Jiang, Z & Ralph, PJ 2016, 'Metabolomics: an emerging frontier of systems biology in marine macrophytes', ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS, vol. 16, pp. 76-92.
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Labbate, M, Seymour, JR, Lauro, F & Brown, MV 2016, 'Anthropogenic Impacts on the Microbial Ecology and Function of Aquatic Environments', FRONTIERS IN MICROBIOLOGY, vol. 7.
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Labeeuw, L, Khey, J, Bramucci, AR, Atwal, H, de la Mata, AP, Harynuk, J & Case, RJ 2016, 'Indole-3-Acetic Acid Is Produced by Emiliania huxleyi Coccolith-Bearing Cells and Triggers a Physiological Response in Bald Cells', FRONTIERS IN MICROBIOLOGY, vol. 7.
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Laiolo, L, McInnes, AS, Matear, R & Doblin, MA 2016, 'Key Drivers of Seasonal Plankton Dynamics in Cyclonic and Anticyclonic Eddies off East Australia', Frontiers in Marine Science, vol. 3, no. 155, pp. 1-14.
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Lavoie, M, Raven, J & Levasseur, M 2016, 'Energy cost and putative benefits of cellular mechanisms modulating buoyancy in aflagellate marine phytoplankton', European Journal of Phycology, vol. 52, no. 2, pp. 239-251.
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Lavoie, M, Raven, JA, Jones, OAH & Qian, H 2016, 'Energy cost of intracellular metal and metalloid detoxification in wild-type eukaryotic phytoplankton', METALLOMICS, vol. 8, no. 10, pp. 1097-1109.
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Lee, H, Golicz, AA, Bayer, PE, Jiao, Y, Tang, H, Paterson, AH, Sablok, G, Krishnaraj, RR, Chan, C-KK, Batley, J, Kendrick, GA, Larkum, AWD, Ralph, PJ & Edwards, D 2016, 'The Genome of a Southern Hemisphere Seagrass Species (Zostera muelleri)', PLANT PHYSIOLOGY, vol. 172, no. 1, pp. 272-283.
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Lepere, C, Ostrowski, M, Hartmann, M, Zubkov, MV & Scanlan, DJ 2016, 'In situ associations between marine photosynthetic picoeukaryotes and potential parasites - a role for fungi?', ENVIRONMENTAL MICROBIOLOGY REPORTS, vol. 8, no. 4, pp. 445-451.
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Liao, Y, Williams, TJ, Ye, J, Charlesworth, J, Burns, BP, Poljak, A, Raftery, MJ & Cavicchioli, R 2016, 'Morphological and proteomic analysis of biofilms from the Antarctic archaeon, Halorubrum lacusprofundi', Scientific Reports, vol. 6, no. 1, pp. 1-17.
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Lichtenberg, M, Larkum, AWD & Kuehl, M 2016, 'Photosynthetic Acclimation of Symbiodinium in hospite Depends on Vertical Position in the Tissue of the Scleractinian Coral Montastrea curta', FRONTIERS IN MICROBIOLOGY, vol. 7.
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Lyndby, NH, Kuhl, M & Wangpraseurt, D 2016, 'Heat generation and light scattering of green fluorescent protein-like pigments in coral tissue', SCIENTIFIC REPORTS, vol. 6.
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Ma, X, Huete, A, Cleverly, J, Eamus, D, Chevallier, F, Joiner, J, Poulter, B, Zhang, Y, Guanter, L, Meyer, W, Xie, Z & Ponce-Campos, G 2016, 'Drought rapidly diminishes the large net CO2 uptake in 2011 over semi-arid Australia', Scientific Reports, vol. 6.
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Matthews, JL, Sproles, AE, Oakley, CA, Grossman, AR, Weis, VM & Davy, SK 2016, 'Menthol-induced bleaching rapidly and effectively provides experimental aposymbiotic sea anemones (Aiptasia sp.) for symbiosis investigations', JOURNAL OF EXPERIMENTAL BIOLOGY, vol. 219, no. 3, pp. 306-310.
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Matthijs, M, Fabris, M, Broos, S, Vyverman, W & Goossens, A 2016, 'Profiling of the Early Nitrogen Stress Response in the Diatom Phaeodactylum Tricornutum Reveals a Novel Family of RING-Domain Transcription Factors', Plant Physiology, vol. 170, no. 1, pp. 489-498.
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Mayers, TJ, Bramucci, AR, Yakimovich, KM & Case, RJ 2016, 'A Bacterial Pathogen Displaying Temperature-Enhanced Virulence of the Microalga Emiliania huxleyi', FRONTIERS IN MICROBIOLOGY, vol. 7.
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Mazard, S, Penesyan, A, Ostrowski, M, Paulsen, IT & Egan, S 2016, 'Tiny Microbes with a Big Impact: The Role of Cyanobacteria and Their Metabolites in Shaping Our Future', MARINE DRUGS, vol. 14, no. 5.
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McCauley, JI, Meyer, BJ, Winberg, PC & Skropeta, D 2016, 'Parameters affecting the analytical profile of fatty acids in the macroalgal genus Ulva', FOOD CHEMISTRY, vol. 209, pp. 332-340.
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McElroy, D, Doblin, MA, Murphy, R, Hochuli, D & Coleman, R 2016, 'A limited legacy effect of copper in marine biofilms', Marine Pollution Bulletin, vol. 109, no. 1, pp. 117-127.
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Messer, LF, Mahaffey, C, Robinson, CM, Jeffries, TC, Baker, KG, Bibiloni Isaksson, J, Ostrowski, M, Doblin, MA, Brown, MV & Seymour, JR 2016, 'High levels of heterogeneity in diazotroph diversity and activity within a putative hotspot for marine nitrogen fixation.', The ISME journal, vol. 10, pp. 1499-1513.
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Mitra, A, Flynn, KJ, Tillmann, U, Raven, JA, Caron, D, Stoecker, DK, Not, F, Hansen, PJ, Hallegraeff, G, Sanders, R, Wilken, S, McManus, G, Johnson, M, Pitta, P, Vage, S, Berge, T, Calbet, A, Thingstad, F, Jeong, HJ, Burkholder, J, Glibert, PM, Graneli, E & Lundgren, V 2016, 'Defining Planktonic Protist Functional Groups on Mechanisms for Energy and Nutrient Acquisition: Incorporation of Diverse Mixotrophic Strategies', PROTIST, vol. 167, no. 2, pp. 106-120.
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Mongin, M, Baird, ME, Tilbrook, B, Matear, RJ, Lenton, A, Herzfeld, M, Wild-Allen, K, Skerratt, J, Margvelashvili, N, Robson, BJ, Duarte, CM, Gustafsson, MS, Ralph, PJ & Steven, AD 2016, 'The exposure of the Great Barrier Reef to ocean acidification.', Nature Communications, vol. 7, pp. 1-8.
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Moore, CE, Brown, T, Keenan, TF, Duursma, RA, van Dijk, AIJM, Beringer, J, Culvenor, D, Evans, B, Huete, A, Hutley, LB, Maier, S, Restrepo-Coupe, N, Sonnentag, O, Specht, A, Taylor, JR, van Gorsel, E & Liddell, MJ 2016, 'Australian vegetation phenology: new insights from satellite remote sensing and digital repeat photography', Biogeosciences Discussions, pp. 1-30.
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Moore, CE, Brown, T, Keenan, TF, Duursma, RA, van Dijk, AIJM, Beringer, J, Culvenor, D, Evans, B, Huete, A, Hutley, LB, Maier, S, Restrepo-Coupe, N, Sonnentag, O, Specht, A, Taylor, JR, van Gorsel, E & Liddell, MJ 2016, 'Reviews and syntheses: Australian vegetation phenology: new insights from satellite remote sensing and digital repeat photography', BIOGEOSCIENCES, vol. 13, no. 17, pp. 5085-5102.
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Mosshammer, M, Strobl, M, Kuhl, M, Klimant, I, Borisov, SM & Koren, K 2016, 'Design and Application of an Optical Sensor for Simultaneous Imaging of pH and Dissolved O-2 with Low Cross-Talk', ACS SENSORS, vol. 1, no. 6, pp. 681-687.
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Murray, SA, Farrell, H, Harwood, T & Zammit, A 2016, 'Is ciguatera moving south in Australia?', Harmful Algae News, vol. 54, pp. 5-6.
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Murray, SA, Smith, K, Rhodes, L, Verma, A, Curley, B, Harwood, DT, Kohli, G, Solomona, D, Rongo, T & Munday, R 2016, 'A new Gambierdiscus species (Dinophyceae) from Rarotonga, Cook Islands: Gambierdiscus cheloniae sp. nov', Harmful Algae, vol. 60, pp. 45-56.
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Murray, SA, Suggett, DJ, Seymour, JR, Doblin, M, Kohli, GS, Fabris, M & Ralph, PJ 2016, 'Unravelling the functional genetics of dinoflagellates: a review of approaches and opportunities', Perspectives in Phycology, vol. 3, no. 1, pp. 37-52.
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Orata, FD, Rosana, ARR, Xu, Y, Simkus, DN, Bramucci, AR, Boucher, Y & Case, RJ 2016, 'Draft genome sequences of four bacterial strains isolated from a polymicrobial culture of naked (N-Type) Emiliania huxleyi CCMP1516', Genome Announcements, vol. 4, no. 4.
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Pernice, M, Sinutok, S, Sablok, G, Commault, A, Schliep, M, Macreadie, P, Rasheed, M & Ralph, P 2016, 'Molecular physiology reveals ammonium uptake and related gene expression in the seagrass Zostera muelleri', Marine Environmental Research.
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Petrou, K, Kranz, SA, Trimborn, S, Hassler, CS, Ameijeiras, SB, Sackett, O, Ralph, PJ & Davidson, AT 2016, 'Southern Ocean phytoplankton physiology in a changing climate', JOURNAL OF PLANT PHYSIOLOGY, vol. 203, pp. 135-150.
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Pitt, FD, Millard, A, Ostrowski, M, Dervish, S, Mazard, S, Paulsen, IT, Zubkov, MV & Scanlan, DJ 2016, 'A Sample-to-Sequence Protocol for Genus Targeted Transcriptomic Profiling: Application to Marine Synechococcus', FRONTIERS IN MICROBIOLOGY, vol. 7.
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R Marcelino, V, Cremen, MCM, Jackson, CJ, Larkum, AAW & Verbruggen, H 2016, 'Evolutionary Dynamics of Chloroplast Genomes in Low Light: A Case Study of the Endolithic Green Alga Ostreobium quekettii.', Genome biology and evolution, vol. 8, no. 9, pp. 2939-2951.
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Raina, J, Tapiolas, D, Motti, CA, Foret, S, Seemann, T, Tebben, J, Willis, BL & Bourne, DG 2016, 'Isolation of an antimicrobial compoundproduced by bacteria associated withreef-building corals', PeerJ, vol. 4, pp. 1-20.
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Raven, JA & Beardall, J 2016, 'The ins and outs of CO2', JOURNAL OF EXPERIMENTAL BOTANY, vol. 67, no. 1, pp. 1-13.
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Raven, JA & Colmer, TD 2016, 'Life at the boundary: photosynthesis at the soil-fluid interface. A synthesis focusing on mosses', JOURNAL OF EXPERIMENTAL BOTANY, vol. 67, no. 6, pp. 1613-1623.
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Rehman, AU, Szabó, M, Deák, Z, Sass, L, Larkum, A, Ralph, P & Vass, I 2016, 'Symbiodinium sp. cells produce light-induced intra- and extracellular singlet oxygen, which mediates photodamage of the photosynthetic apparatus and has the potential to interact with the animal host in coral symbiosis.', The New phytologist, vol. 212, pp. 472-484.
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Restrepo Coupe, N, Huete, A, Davies, K, Cleverly, J, Beringer, J, Eamus, D, van Gorsel, E, Hutley, LB & Meyer, WS 2016, 'MODIS vegetation products as proxies of photosynthetic potential along a gradient of meteorologically and biologically driven ecosystem productivity', Biogeosciences, vol. 13, no. 19, pp. 5587-5608.
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Restrepo-Coupe, N, Huete, A, Davies, K, Cleverly, J, Beringer, J, Eamus, D, van Gorsel, E, Hutley, LB & Meyer, WS 2016, 'MODIS vegetation products as proxies of photosynthetic potentialalong a gradient of meteorologically and biologically drivenecosystem productivity', Biogeosciences Discussions, vol. 13, pp. 5587-5608.
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Revsbech, NP, Trampe, E, Lichtenberg, M, Ward, DM & Kuhl, M 2016, 'In Situ Hydrogen Dynamics in a Hot Spring Microbial Mat during a Diel Cycle', APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol. 82, no. 14, pp. 4209-4217.
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Rhodes, L, Harwood, T, Smith, K, Argyle, P & Munday, R 2016, 'Corrigendum to ‘Production of ciguatoxin and maitotoxin by strains of Gambierdiscus australes, G. pacificus and G. polynesiensis (Dinophyceae) isolated from Rarotonga, Cook Islands’ [Harmful Algae 39 (2014) 185–190] (S1568988314001449) (10.1016/j.hal.2014.07.018))', Harmful Algae, vol. 55, p. 295.
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Rickelt, LF, Lichtenberg, M, Trampe, ECL & Kühl, M 2016, 'Fiber-Optic Probes for Small Scale Measurements of Scalar Irradiance', Photochemistry and Photobiology, vol. 92, no. 2, pp. 331-342.
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Rinke, C, Low, S, Woodcroft, BJ, Raina, J, Skarshewski, A, Le, XH, Butler, MK, Stocker, R, Seymour, JR, Tyson, GW & Hugenholtz, P 2016, 'Validation of picogram- and femtogram-input DNA libraries for microscale metagenomics', PeerJ, vol. 2016, no. 9.
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Rogers, K, Boon, PI, Branigan, S, Duke, NC, Field, CD, Fitzsimons, JA, Kirkman, H, Mackenzie, JR & Saintilan, N 2016, 'The state of legislation and policy protecting Australia's mangrove and salt marsh and their ecosystem services', MARINE POLICY, vol. 72, pp. 139-155.
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Ros, M, Pernice, M, Le Guillou, S, Doblin, MA, Schrameyer, V & Laczka, O 2016, 'Colorimetric detection of caspase 3 activity and reactive oxygen derivatives: Potential early indicators of thermal stress in corals', Journal of Marine Biology, vol. 2016, pp. 1-11.
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Rosana, ARR, Orata, FD, Xu, Y, Simkus, DN, Bramucci, AR, Boucher, Y & Case, RJ 2016, 'Draft genome sequences of seven bacterial strains isolated from a polymicrobial culture of coccolith-bearing (C-Type) Emiliania huxleyi M217', Genome Announcements, vol. 4, no. 4.
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Roy Chowdhury, P, Scott, M, Worden, P, Huntington, P, Hudson, B, Karagiannis, T, Charles, I & Djordjevic, S 2016, 'Genomic islands 1 and 2 play key roles in the evolution of extensively drug-resistant ST235 isolates of Pseudomonas aeruginosa', Open Biology, vol. 6, pp. 1-12.
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Ruvindy, R, White, RA, Neilan, BA & Burns, BP 2016, 'Unravelling core microbial metabolisms in the hypersaline microbial mats of Shark Bay using high-throughput metagenomics', ISME Journal, vol. 10, pp. 183-196.
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Sablok, G, Mudunuri, SB, Edwards, D & Ralph, PJ 2016, 'Chloroplast genomics: Expanding resources for an evolutionary conserved miniature molecule with enigmatic applications', Current Plant Biology, vol. 7-8, pp. 34-38.
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Sablok, G, Pérez-Pulido, AJ, Do, T, Seong, TY, Casimiro-Soriguer, CS, La Porta, N, Ralph, PJ, Squartini, A, Muñoz-Merida, A & Harikrishna, JA 2016, 'PlantFuncSSR: Integrating first and next generation transcriptomics for mining of SSR-functional domains markers', Frontiers in Plant Science, vol. 7, pp. 1-9.
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Sackett, O, Petrou, K, Reedy, B, Hill, R, Doblin, M, Beardall, J, Ralph, P & Heraud, P 2016, 'Snapshot prediction of carbon productivity, carbon and protein content in a Southern Ocean diatom using FTIR spectroscopy.', The ISME journal, vol. 10, pp. 416-426.
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Saleska, SR, Wu, J, Guan, K, Araujo, AC, Huete, A, Nobre, AD & Restrepo-Coupe, N 2016, 'Dry-season greening of Amazon forests.', Nature, vol. 531, no. 7594, pp. E4-E5.
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Schrameyer, V, Kraemer, W, Hill, R, Jeans, J, Larkum, AWD, Bischof, K, Campbell, DA & Ralph, PJ 2016, 'Under high light stress two Indo-Pacific coral species display differential photodamage and photorepair dynamics', MARINE BIOLOGY, vol. 163, no. 8.
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Siboni, N, Balaraju, V, Carney, R, Labbate, M & Seymour, JR 2016, 'Spatiotemporal Dynamics of Vibrio spp. within the Sydny harbour Estuary', FRONTIERS IN MICROBIOLOGY, vol. 7.
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Signal, B, Gloss, BS & Dinger, ME 2016, 'Computational approaches for functional prediction and characterisation of long noncoding RNAs', Trends in Genetics, vol. 32, pp. 620-637.

Signal, B, Gloss, BS, Dinger, ME & Mercer, TR 2016, 'Machine-learning annotation of human splicing branchpoints', BioRxiv, pp. 094003-094003.

Slavov, C, Schrameyer, V, Reus, M, Ralph, PJ, Hill, R, Buechel, C, Larkum, AWD & Holzwarth, AR 2016, '"Super-quenching" state protects Symbiodinium from thermal stress - Implications for coral bleaching', BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, vol. 1857, no. 6, pp. 840-847.
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Smith, SR, Gle, C, Abbriano, RM, Traller, JC, Davis, A, Trentacoste, E, Vernet, M, Allen, AE & Hildebrand, M 2016, 'Transcript level coordination of carbon pathways during silicon starvation-induced lipid accumulation in the diatom Thalassiosira pseudonana', NEW PHYTOLOGIST, vol. 210, no. 3, pp. 890-904.
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Stittrich, AB, Ashworth, J, Shi, M, Robinson, M, Mauldin, D, Brunkow, ME, Biswas, S, Kim, JM, Kwon, KS, Jung, JU, Galas, D, Serikawa, K, Duerr, RH, Guthery, SL, Peschon, J, Hood, L, Roach, JC & Glusman, G 2016, 'Genomic architecture of inflammatory bowel disease in five families with multiple affected individuals.', Human Genome Variation, vol. 3, pp. 1-9.
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Stocker, BD, Prentice, IC, Cornell, SE, Davies-Barnard, T, Finzi, AC, Franklin, O, Janssens, I, Larmola, T, Manzoni, S, Nasholm, T, Raven, JA, Rebel, KT, Reed, S, Vicca, S, Wiltshire, A & Zaehle, S 2016, 'Terrestrial nitrogen cycling in Earth system models revisited', NEW PHYTOLOGIST, vol. 210, no. 4, pp. 1165-1168.
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Sutherland, DL, Montemezzani, V, Mehrabadi, A & Craggs, RJ 2016, 'Winter-time CO2 addition in high rate algal mesocosms for enhanced microalgal performance', WATER RESEARCH, vol. 89, pp. 301-308.
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Tandberg, JI, Lagos, LX, Berger, E, Rishovd, A-L, Roos, N, Varkey, D, Paulson, I & Winther-Larsen, HC 2016, 'Zebrafish as a model host for studies of Piscirickettsia salmonis and its outer membrane vesicles', FISH & SHELLFISH IMMUNOLOGY, vol. 53, pp. 86-86.

Tandberg, JI, Lagos, LX, Langlete, P, Berger, E, Rishovd, A-L, Roos, N, Varkey, D, Paulsen, IT & Winther-Larsen, HC 2016, 'Comparative Analysis of Membrane Vesicles from Three Piscirickettsia salmonis Isolates Reveals Differences in Vesicle Characteristics', PLOS ONE, vol. 11, no. 10.
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ten Hoopen, P, Amid, C, Buttigieg, PL, Pafilis, E, Bravakos, P, Cerdeno-Tarraga, AM, Gibson, R, Kahlke, T, Legaki, A, Murthy, KN, Papastefanou, G, Pereira, E, Rossello, M, Toribio, AL & Cochrane, G 2016, 'Value, but high costs in post-deposition data curation', DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
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Thevarajah, JJ, Bulanadi, JC, Wagner, M, Gaborieau, M & Castignolles, P 2016, 'Towards a less biased dissolution of chitosan', ANALYTICA CHIMICA ACTA, vol. 935, pp. 258-268.
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Thevarajah, JJ, O'Connor, MD, Castignolles, P & Gaborieau, M 2016, 'Capillary Electrophoresis to Monitor Peptide Grafting onto Chitosan Films in Real Time', JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, no. 116.
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Thevarajah, JJ, Sutton, AT, Maniego, AR, Whitty, EG, Harrisson, S, Cottet, H, Castignolles, P & Gaborieau, M 2016, 'Quantifying the Heterogeneity of Chemical Structures in Complex Charged Polymers through the Dispersity of Their Distributions of Electrophoretic Mobilities or of Compositions', ANALYTICAL CHEMISTRY, vol. 88, no. 3, pp. 1674-1681.
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Trampe, E & Kuhl, M 2016, 'CHLOROPHYLL F DISTRIBUTION AND DYNAMICS IN CYANOBACTERIAL BEACHROCK BIOFILMS', JOURNAL OF PHYCOLOGY, vol. 52, no. 6, pp. 990-996.
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Trampe, ECL, Larsen, JEN, Glaring, MA, Stougaard, P & Kuhl, M 2016, 'In situ Dynamics of O-2, pH, Light, and Photosynthesis in Ikaite Tufa Columns (Ikka Fjord, Greenland)-A Unique Microbial Habitat', FRONTIERS IN MICROBIOLOGY, vol. 7.
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Tran, N-AT, Padula, MP, Evenhuis, CR, Commault, AS, Ralph, PJ & Tamburic, B 2016, 'Proteomic and biophysical analyses reveal a metabolic shift in nitrogen deprived Nannochloropsis oculata', ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS, vol. 19, pp. 1-11.
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Tschitschko, B, Williams, TJ, Allen, MA, Zhong, L, Raftery, MJ & Cavicchioli, R 2016, 'Ecophysiological Distinctions of Haloarchaea from a Hypersaline Antarctic Lake as Determined by Metaproteomics', APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol. 82, no. 11, pp. 3165-3173.
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Varkey, D, Mazard, S, Ostrowski, M, Tetu, SG, Haynes, P & Paulsen, IT 2016, 'Effects of low temperature on tropical and temperate isolates of marine Synechococcus', ISME JOURNAL, vol. 10, no. 5, pp. 1252-1263.
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Verma, A, Hoppenrath, M, Harwood, T, Brett, S, Rhodes, L & Murray, S 2016, 'Molecular phylogeny, morphology and toxigenicity of Ostreopsis cf. siamensis (Dinophyceae) from temperate south-east Australia', PHYCOLOGICAL RESEARCH, vol. 64, no. 3, pp. 146-159.
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Verma, A, Hoppenrath, M, Jose Dorantes-Aranda, J, Harwood, DT & Murray, SA 2016, 'Molecular and phylogenetic characterization of Ostreopsis (Dinophyceae) and the description of a new species, Ostreopsis rhodesae sp nov., from a subtropical Australian lagoon', HARMFUL ALGAE, vol. 60, pp. 116-130.
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Wangpraseurt, D, Jacques, SL, Petrie, T & Kuhl, M 2016, 'Monte Carlo Modeling of Photon Propagation Reveals Highly Scattering Coral Tissue', FRONTIERS IN PLANT SCIENCE, vol. 7.
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Wangpraseurt, D, Pernice, M, Guagliardo, P, Kilburn, MR, Clode, PL, Polerecky, L & Kuehl, M 2016, 'Light microenvironment and single-cell gradients of carbon fixation in tissues of symbiont-bearing corals', ISME JOURNAL, vol. 10, no. 3, pp. 788-792.
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Watanabe, S, Kuzhiumparambil, U, Winiarski, Z & Fu, S 2016, 'Biotransformation of synthetic cannabinoids JWH-018, JWH-073 and AM2201 by Cunninghamella elegans', Forensic Science International, vol. 261, pp. 33-42.
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Watanabe, S, Kuzhiumparambil, U, Winiarski, Z & Fu, S 2016, 'Data on individual metabolites of synthetic cannabinoids JWH-018, JWH-073 and AM2201 by Cunninghamella elegans', Data in Brief, vol. 7, pp. 332-340.
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Williamson, A, Hjerde, E & Kahlke, T 2016, 'Analysis of the distribution and evolution of the ATP-dependent DNA ligases of bacteria delineates a distinct phylogenetic group 'Lig E'', MOLECULAR MICROBIOLOGY, vol. 99, no. 2, pp. 274-290.
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Wu, J, Albert, LP, Lopes, AP, Restrepo-Coupe, N, Hayek, M, Wiedemann, KT, Guan, K, Stark, SC, Christoffersen, B, Prohaska, N, Tavares, JV, Marostica, S, Kobayashi, H, Ferreira, ML, Campos, KS, da Silva, R, Brando, PM, Dye, DG, Huxman, TE, Huete, AR, Nelson, BW & Saleska, SR 2016, 'Leaf development and demography explain photosynthetic seasonality in Amazon evergreen forests.', Science, vol. 351, no. 6276, pp. 972-976.
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Xie, Z, Huete, A, Ma, X, Restrepo-Coupe, N, Devadas, R, Clarke, K & Lewis, M 2016, 'Landsat and GRACE observations of arid wetland dynamics in a dryland river system under multi-decadal hydroclimatic extremes', JOURNAL OF HYDROLOGY, vol. 543, pp. 818-831.
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Xie, Z, Huete, A, Restrepo-Coupe, N, Ma, X, Devadas, R & Caprarelli, G 2016, 'Spatial partitioning and temporal evolution of Australia's total water storage under extreme hydroclimatic impacts', Remote Sensing of Environment, vol. 183, pp. 43-52.
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Ye, J, Zhang, R, Nielsen, S, Joseph, SD, Huang, D & Thomas, T 2016, 'A Combination of Biochar Mineral Complexes and Compost Improves Soil Bacterial Processes, Soil Quality, and Plant Properties', FRONTIERS IN MICROBIOLOGY, vol. 7.
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Zhu, Y, Ishizaka, J, Tripathy, SC, Wang, S, Mino, Y, Matsuno, T & Suggett, DJ 2016, 'Variation of the photosynthetic electron transfer rate and electron requirement for daily net carbon fixation in Ariake Bay, Japan', Journal of Oceanography, vol. 72, no. 5, pp. 761-776.
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Conferences

Ajani, P 2016, 'Modelling bloom formation of the toxic dinoflagellates Dinophysis acuminata and Dinophysis caudata in a highly modified drowned river valley, south eastern Australia (Oral Presentation).', Australian Shellfish Quality Assurance Science Day 2016, Sydney Australia.

Ajani, PA 2016, 'Microalgae: coming into bloom (Invited Oral Presentation)', Science Week, Office of Environment and Heritage 2016, Sydney Australia.

Ajani, PA, Kohli, GS, Darling, AE, Liu, M & Ostrowski, M 2016, 'Genome variability in the ecologically significant marine diatom Leptocylindrus (Bacillariophyta) in a southern hemisphere upwelling system (Poster Presentation)', Sydney Bioinformatics Research Symposium 2016, Sydney, Australia.

Ajani, PA, Kohli, GS, Darling, AE, Liu, M, Ostrowski, M & S, A 2016, 'Genome variability in the ecologically significant marine diatom Leptocylindrus (Bacillariophyta) in a southern hemisphere upwelling system (Poster Presentation)', Society for Molecular Biology and Evolution Conference, Gold Coast, Australia.

Craggs, RJ, Park, J, Sutherland, DL & Heubeck, S 2016, 'Enhanced Pond Systems for Dairy farm effluent treatment.', BOPRC and DairyNZ workshop and site visit to demonstration of fish feed from dairy farm effluent.

Hawes, RJ, Park, J, Sutherland, DL & Heubeck, S 2016, 'Cambridge Enhanced Pond System Trial', Workshop on pond performance with Tauranga CCC.

Huete, A, Restrepo-Coupe, N, Wu, J & Saleska, S 2016, 'Climate and leaf phenology controls on tropical forest photosynthesis', Geoscience and Remote Sensing Symposium (IGARSS), 2016 IEEE International, IEEE International Geoscience and Remote Sensing Symposium, IEEE, Beijing, China, pp. 1731-1733.
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Park, J, Craggs, RJ, Sutherland, DL & Heubeck, S 2016, 'Economic construction and operation of hectare-scale High Rate Algal Pond systems', 11th IWA Specialist Group Conference and workshop on Wastewater Pond Technology, Leeds, UK.

Sutherland, DL 2016, 'Summary of the impacts of proposed Waiau Enhancement Project on the periphyton and macrophytes, including rare and threatened species, in Lakes Te Anau and Manapouri', Waiau Enhancement.

Reports

Ajani, PA & Murray, S 2016, A Review of Toxic Algal Species towards Improving Management of Toxic Blooms in New South Wales, pp. 1-71.
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Murray, SA, Kohli, GS, Harwood, DT, Laczka, O & Boulter, M Fisheries Research and Development Corporation 2016, Safeguarding seafood consumers in NSW from ciguatera fish poisoning, no. ISBN 978-0-646-95465-3, pp. 1-51, Canberra, ACT, Australia.

Ruvindy, R, Ajani, P & Murray, S 2016, Microalgal Community Composition Assessment in Warringah Lagoons 2015-2016.

Sutherland, DL 2016, Visual survey of the benthic habitat underneath the salmon farms in a hydro-power network., Christchurch, New Zealand.

Sutherland, DL & Burton, T 2016, Ecological assessment of 5 Canterbury lakes using LakeSPI and weed surveillance in 23 waterbodies, Christchurch, New Zealand.

Sutherland, DL & Craggs, R 2016, Filamentous algal nutrient scrubbers for treatment of diffuse nutrient pollution, Christchurch, New Zealand.

Sutherland, DL & James, M 2016, Enhancement package for the Manapouri Power Scheme - effects on aquatic biological communities, Christchurch, NZ.

Sutherland, DL & Taumoepeau, A 2016, Macrophyte monitoring in Waituna Lagoon - summer 2016, Christchurch, New Zealand.

Wilkinson, SJ, Stoller, P, Ralph, P & Hamdorf, B UTS 2016, Feasibility of Algae Building Technology in Sydney, Feasibility of Algae Building Technology in Sydney, no. 1, pp. 1-56, Sydney Australia.
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Other

Ajani, PA 2016, 'Collecting data to help protect Australia's waters from toxic algal blooms.', The Conversation.
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McInnes, AS, Messer, LF, Laiolo, L, Laverock, B, Laczka, O, Brown, M, Seymour, JR & Doblin, MA 2016, 'Microbial utilization of nitrogen in cold core eddies: size does matter'.
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