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Publications

Chapters

Hall, CC, Cruz, J, Wood, M, Zegarac, R, DeMars, D, Carpenter, J, Kanazawa, A & Kramer, D 2013, 'Photosynthetic measurements with the idea spec: An integrated diode emitter array spectrophotometer/fluorometer' in Advanced Topics in Science and Technology in China, pp. 184-188.
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Kumari, P, Kumar, M, Reddy, CRK & Jha, B 2013, 'Algal lipids, fatty acids and sterols' in Functional Ingredients from Algae for Foods and Nutraceuticals, Woodhead Publishing Limited, USA, pp. 87-134.
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Larkum, AWD 2013, 'The golden apples of the sun: The history of photosynthesis—So far' in Advanced Topics in Science and Technology in China, pp. 834-839.
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Li, Y, Larkum, A, Schliep, MT, Kuhl, M, Neilan, B & Chen, M 2013, 'Newly isolated Chl d-containing cyanobacteria' in Kuang, T, Lu, C & Zhang, L (eds), Photosynthesis Research for Food, Fuel and the Future - 15th International Conference on Photosynthesis, Springer-Verlag GmbH, Beijing, pp. 686-690.
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McCauley, JI, Zivanovic, A & Skropeta, D 2013, 'Bioassays for Anticancer Activities' in Metabolomics Tools for Natural Product Discovery, Springer.
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Journal articles

Baird, ME, Ralph, PJ, Rizwi, F, Wild-Allen, K & Steven, A 2013, 'A dynamic model of the cellular carbon to chlorophyll ratio applied to a batch culture and a continental shelf ecosystem', Limnology and Oceanography, vol. 58, no. 4, pp. 1215-1226.
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Behrendt, L, Staal, M, Cristescu, SM, Harren, FJ, Schliep, M, Larkum, AW & Kühl, M 2013, 'Reactive oxygen production induced by near-infrared radiation in three strains of the Chl d-containing cyanobacterium Acaryochloris marina.', F1000Research, vol. 2, pp. 44-44.
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Brading, P, Warner, ME, Smith, DJ & Suggett, DJ 2013, 'Contrasting modes of inorganic carbon acquisition amongst Symbiodinium (Dinophyceae) phylotypes', New Phytologist, vol. 200, no. 2, pp. 432-442.
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Bramucci, A, Han, S, Beckers, J, Haas, C & Lanoil, B 2013, 'Composition, diversity, and stability of microbial assemblages in seasonal lake ice, Miquelon Lake, Central Alberta', Biology, vol. 2, no. 2, pp. 514-532.
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Camp, EF, Lohr, KE, Barry, SC, Bush, PG, Jacoby, CA & Manfrino, C 2013, 'MICROHABITAT ASSOCIATIONS OF LATE JUVENILE NASSAU GROUPER (EPINEPHELUS STRIATUS) OFF LITTLE CAYMAN, BWI', BULLETIN OF MARINE SCIENCE, vol. 89, no. 2, pp. 571-581.
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Carrillo, MC, Rowe, CC, Szoeke, C, Masters, CL, Ames, D, O'Meara, T, Macaulay, SL, Milner, A, Ellis, KA, Maruff, P, Rainey-Smith, SR, Martins, RN, Bain, LJ, Head, RJ & NIA/Alzheimer Association and International Working Group 2013, 'Research and standardization in Alzheimer's trials: reaching international consensus.', Alzheimer's & dementia : the journal of the Alzheimer's Association, vol. 9, no. 2, pp. 160-168.
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Ceh, J, Kilburn, MR, Cliff, JB, Raina, J, van Keulen, M & Bourne, DG 2013, 'Nutrient cycling in early coral life stages: Pocillopora damicornis larvae provide their algal symbiont (Symbiodinium) with nitrogen acquired from bacterial associates', Ecology and Evolution, vol. 3, no. 8, pp. 2393-2400.
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Cerveny, J, Sinetova, MA, Valledor, L, Sherman, LA & Nedbal, L 2013, 'Ultradian metabolic rhythm in the diazotrophic cyanobacterium Cyanothece sp ATCC 51142', PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, vol. 110, no. 32, pp. 13210-13215.
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Clark, J, Poore, AG, Ralph, PJ & Doblin, MA 2013, 'Potential for adaptation in response to thermal stress in an intertidal macroalga', Journal of Phycology, vol. 49, no. 4, pp. 630-639.
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Dafforn, KA, Kelaher, BP, Simpson, SL, Coleman, MA, Hutchings, PA, Clark, GF, Knott, NA, Doblin, MA & Johnston, EL 2013, 'Polychaete richness and abundance enhanced in anthropogenically modified estuaries despite high concentrations of toxic contaminants', PLoS One, vol. 8, no. 9, pp. 1-10.
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Dennis, PG, Seymour, JR, Kumbun, K & Tyson, G 2013, 'Diverse populations of lake water bacteria exhibit chemotaxis towards inorganic nutrients', ISME Journal, vol. 7, no. 8, pp. 1661-1664.
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Exton, DA, Suggett, DJ, McGenity, TJ & Steinke, M 2013, 'Chlorophyll-normalized isoprene production in laboratory cultures of marine microalgae and implications for global models', Limnology and Oceanography, vol. 58, no. 4, pp. 1301-1311.
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Garby, T, Walter, M, Larkum, A & Neilan, BA 2013, 'Diversity Of Cyanobacterial Biomarker Genes From The Stromatolites Of Shark Bay, Western Australia', Environmental Microbiology, vol. 15, no. 5, pp. 1464-1475.
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Gleason, FH, van Ogtrop, F, Lilje, O & Larkum, A 2013, 'Ecological roles of zoosporic parasites in blue carbon ecosystems', Fungal Ecology, vol. 6, no. 5, pp. 319-327.
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Gobler, CJ, Lobanov, AV, Tang, Y, Turanov, AA, Zhang, Y, Doblin, MA, Taylor, GT, Sanudo-Wilhelm, SA, Grigoriev, IV & Gladyshev, VN 2013, 'The central role of selenium in the biochemistry and ecology of the harmful pelagophyte, Aureococcus anophagefferens', The ISME Journal, vol. 7, no. 7, pp. 1333-1343.
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Grob, C, Ostrowski, M, Holland, RJ, Heldal, M, Norland, S, Erichsen, ES, Blindauer, C, Martin, AP, Zubkov, MV & Scanlan, DJ 2013, 'Elemental composition of natural populations of key microbial groups in Atlantic waters', ENVIRONMENTAL MICROBIOLOGY, vol. 15, no. 11, pp. 3054-3064.
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Gupta, V, Trivedi, N, Kumar, M, Reddy, CRK & Jha, B 2013, 'Purification and characterization of exo-beta-agarase from an endophytic marine bacterium and its catalytic potential in bioconversion of red algal cell wall polysaccharides into galactans', BIOMASS & BIOENERGY, vol. 49, pp. 290-298.
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Gustafsson, MS, Baird, ME & Ralph, PJ 2013, 'The interchangeability of autotrophic and heterotrophic nitrogen sources in Scleractinian coral symbiotic relationships: A numerical study', Ecological Modelling, vol. 250, pp. 183-194.
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Hildebrand, M, Abbriano, RM, Polle, JE, Traller, JC, Trentacoste, EM, Smith, SR & Davis, AK 2013, 'Metabolic and cellular organization in evolutionarily diverse microalgae as related to biofuels production', CURRENT OPINION IN CHEMICAL BIOLOGY, vol. 17, no. 3, pp. 506-514.
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Hong, Y, Burford, MA, Ralph, PJ, Udy, JW & Doblin, MA 2013, 'The cyanobacterium Cylindrospermopsis raciborskii is facilitated by copepod selective grazing', Harmful Algae, vol. 29, no. 1, pp. 14-21.
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Kopp, C, Pernice, M, Domart-Coulon, I, Djediat, C, Spangenberg, JE, Alexander, DTL, Hignette, M, Meziane, T & Meibom, A 2013, 'Highly Dynamic Cellular-Level Response of Symbiotic Coral to a Sudden Increase in Environmental Nitrogen', MBIO, vol. 4, no. 3.
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Kramer, W, Schrameyer, V, Hill, R, Ralph, PJ & Bischof, K 2013, 'PSII Activity And Pigment Dynamics Of Symbiodinium In Two Indo-pacific Corals Exposed To Short-term High-light Stress', Marine Biology, vol. 160, no. 3, pp. 563-577.
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Krug, LA, Gherardi, DF, Stech, JL, Leão, ZM, Kikuchi, RK, Junior, ER & Suggett, DJ 2013, 'The construction of causal networks to estimate coral bleaching intensity', Environmental Modelling & Software, vol. 42, no. 1, pp. 157-167.
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Kumar, M, Reddy, CRK & Jha, B 2013, 'The ameliorating effect of Acadian marine plant extract against ionic liquids-induced oxidative stress and DNA damage in marine macroalga Ulva lactuca.', Journal of Applied Phycology, vol. 25, no. 2, pp. 369-378.
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Kuzhiumparambil, U & Fu, S 2013, 'Effect of hydrogen peroxide oxidation systems on human urinary steroid profiles', Analytical Methods, vol. 5, no. 17, pp. 4402-4408.
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Kuzhiumparambil, U & Fu, S 2013, 'Effect of oxidizing adulterants on human urinary steroid profiles', Steroids, vol. 78, no. 2, pp. 288-296.
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Lawrenz, E, Silsbe, G, Capuzzo, E, Ylostalo, P, Forster, RM, Simis, SG, Prasil, O, Kromkamp, JC, Hickman, AE, Moore, CM, Forget, M, Geider, RJ & Suggett, DJ 2013, 'Predicting the electron requirement for carbon fixation in seas and oceans', Plos One, vol. 8, no. 3, pp. 0-0.
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Lee, LK, Bryant, KJ, Bouveret, R, Lei, P-W, Duff, AP, Harrop, SJ, Huang, EP, Harvey, RP, Gelb, MH, Gray, PP, Curmi, PM, Cunningham, AM, Church, WB & Scott, KF 2013, 'Selective inhibition of human group IIA-secreted phospholipase A2 (hGIIA) signaling reveals arachidonic acid metabolism is associated with colocalization of hGIIA to vimentin in rheumatoid synoviocytes.', The Journal of biological chemistry, vol. 288, no. 21, pp. 15269-15279.
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Manfrino, C, Jacoby, CA, Camp, E & Frazer, TK 2013, 'A positive trajectory for corals at Little Cayman Island.', PLoS ONE, vol. 8, no. 10, pp. e75432-e75432.
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McGinley, MP, Suggett, DJ & Warner, ME 2013, 'Transcript patterns of chloroplast-encoded genes in cultured Symbiodinium spp. (Dinophyceae): testing the influence of a light shift and diel periodicity', Journal of Phycology, vol. 49, no. 4, pp. 709-718.
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Mengoni, A, Focardi, A, Bacci, G & Ugolini, A 2013, 'High genetic diversity and variability of bacterial communities associated with the sandhopper Talitrus saltator (Montagu) (Crustacea, Amphipoda)', ESTUARINE COASTAL AND SHELF SCIENCE, vol. 131, pp. 75-82.
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Mitchell, J, Seuront, L, Doubell, M, Losic, D, Voelcker, N, Seymour, JR & Lal, R 2013, 'The Role Of Diatom Nanostructures In Biasing Diffusion To Improve Uptake In A Patchy Nutrient Environment', PLoS One, vol. 8, no. 5, pp. 1-9.
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Petrou, K, Jimenez-denness, I, Chartrand, KM, Mccormack, C, Rasheed, M & Ralph, PJ 2013, 'Seasonal heterogeneity in the photophysiological response to air exposure in two tropical intertidal seagrass species', Marine Ecology Progress Series, vol. 482, pp. 93-106.
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Raina, J, Tapiolas, DM, Foret, S, Lutz, A, Abrego, D, Ceh, J, Seneca, FO, Clode, PL, Bourne, DG, Willis, BL & Motti, CA 2013, 'DMSP biosynthesis by an animal and its role in coral thermal stress response', Nature, vol. 502, pp. 677-680.
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Raven, J, Beardall, J, Larkum, A & Sanchez-baracaldo, P 2013, 'Interactions of photosynthesis with genome size and function', Philosophical Transactions of the Royal Society B, vol. 368, no. 1622, pp. 1-11.
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Roudnew, B, Lavery, T, Seymour, JR, Smith, R & Mitchell, J 2013, 'Spatially Varying Complexity Of Bacterial And Virus-like Particle Communities Within An Aquifer System', Aquatic Microbial Ecology, vol. 68, no. 3, pp. 259-266.
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Rowe, CC, Bourgeat, P, Ellis, KA, Brown, B, Lim, YY, Mulligan, R, Jones, G, Maruff, P, Woodward, M, Price, R, Robins, P, Tochon-Danguy, H, O'Keefe, G, Pike, KE, Yates, P, Szoeke, C, Salvado, O, Macaulay, SL, O'Meara, T, Head, R, Cobiac, L, Savage, G, Martins, R, Masters, CL, Ames, D & Villemagne, VL 2013, 'Predicting Alzheimer disease with β-amyloid imaging: results from the Australian imaging, biomarkers, and lifestyle study of ageing.', Annals of neurology, vol. 74, no. 6, pp. 905-913.
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Sackett, O, Petrou, K, Reedy, B, De Grazia, A, Hill, R, Doblin, M, Beardall, J, Ralph, P & Heraud, P 2013, 'Phenotypic Plasticity of Southern Ocean Diatoms: Key to Success in the Sea Ice Habitat?', PLOS ONE, vol. 8, no. 11.
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Schliep, MT, Cavigliasso, G, Quinnell, RG, Stranger, R & Larkum, A 2013, 'Formyl group modification of chlorophyll a: a major evolutionary mechanism in oxygenic photosynthesis', Plant Cell and Environment, vol. 36, pp. 521-527.
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Sinutok, S, Hill, R, Doblin, MA & Ralph, PJ 2013, 'Diurnal photosynthetic response of the motile symbiotic benthic foraminiferan Marginopora vertebralis', Marine Ecology Progress Series, vol. 478, pp. 127-138.
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Smith, R, Jeffries, TC, Roudnew, B, Seymour, JR, Fitch, AJ, Simons, KL, Speck, PG, Newton, K, Brown, MH & Mitchell, JG 2013, 'Confined aquifers as viral reservoirs', Environmental Microbiology Reports, vol. 5, no. 5, pp. 725-730.
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Suggett, DJ, Dong, LF, Lawson, T, Lawrenz, E, Torres, L & Smith, DJ 2013, 'Light availability determines susceptibility of reef building corals to ocean acidification', Coral Reefs, vol. 32, no. 2, pp. 327-337.
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Tapiolas, DM, Raina, J, Lutz, A, Willis, BL & Motti, CA 2013, 'Direct measurement of dimethylsulfoniopropionate (DMSP) in reef-building corals using quantitative nuclear magnetic resonance (qNMR) spectroscopy', Journal of Experimental Marine Biology and Ecology, vol. 443, pp. 85-89.
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Van Moerkercke, A, Fabris, M, Pollier, J, Baart, GJE, Rombauts, S, Hasnain, G, Rischer, H, Memelink, J, Oksman-Caldentey, K-M & Goossens, A 2013, 'CathaCyc, a Metabolic Pathway Database Built from Catharanthus roseus RNA-Seq Data', PLANT AND CELL PHYSIOLOGY, vol. 54, no. 5, pp. 673-685.
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Ye, Z, Robakowski, P & Suggett, DJ 2013, 'A mechanistic model for the light response of photosynthetic electron transport rate based on light harvesting properties of photosynthetic pigment molecules', Planta, vol. 237, no. 3, pp. 837-847.
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Ye, Z, Suggett, DJ, Robakowski, P & Kang, H 2013, 'A mechanistic model for the photosynthesis-light response based on the photosynthetic electron transport of photosystem II in C3 and C4 species', New Phytologist, vol. 199, no. 1, pp. 110-120.
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York, PH, Gruber, RK, Hill, R, Ralph, PJ, Booth, DJ & Macreadie, PI 2013, 'Physiological and Morphological Responses of the Temperate Seagrass Zostera muelleri to Multiple Stressors: Investigating the Interactive Effects of Light and Temperature', PLOS ONE, vol. 8, no. 10.
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Conferences

Bretherton, L, Lawson, T, Moore, CM, Poulton, A, Geider, R & Suggett, D 2013, 'LIGHT AVAILABILITY AFFECTS THE OCEAN ACIDIFCATION RESPONSE IN COCCOLITHOPHORES', PHYCOLOGIA, INT PHYCOLOGICAL SOC, pp. 13-13.

Howes, JM, Stuart, BH & Ralph, PJ 2013, 'Assessing metabolic variation of endosymbiotic and cultured Symbiodinium microadriaticum using synchrotron imaging FTIR spectroscopy', 7th International Workshop on Infrared Microscopy and Spectroscopy with Accelerator-Based Sources Abstracts, 7th International Workshop on Infrared Microscopy and Spectroscopy with Accelerator-Based Sources.

Howes, JM, Stuart, BH & Ralph, PJ 2013, 'Macromolecular composition varies significantly between genetic clades of Symbiodinium microadriaticum', 10th International Phycological Congress Abstracts, 10th International Phycological Congress.

Klement, M, Šafránek, D, Děd, T, Pejznoch, A, Nedbal, L, Steuer, R, Červený, J & Müller, S 2013, 'A comprehensive web-based platform for domain-specific biological models', Electronic Notes in Theoretical Computer Science, pp. 61-67.
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Lawrenz, E, Huete-Ortega, M, Suggett, DJ & Geider, RJ 2013, 'ASSESSING THE RELATIONSHIPS BETWEEN ELECTRON TRANSFER AND CARBON FIXATION IN NITROGEN LIMITED MARINE PHYTOPLANKTON', PHYCOLOGIA, INT PHYCOLOGICAL SOC, pp. 59-59.

Sutherland, DL, Howard-Williams, C, Turnbull, M, Broady, P & Craggs, R 1970, 'Mixing it up – is more better? Effects of mixing frequency on microalgae in a wastewater high rate algal pond', Annual Biological School Conference, Christchurch, NZ.

Reports

Blount, C, Alderson, B, Roberts, C, Cummings, D, Pernice, M & Neilson, J 2013, Bimonthly Coral Monitoring Report: Dredging Baseline Report − Ichthys Nearshore Environmental Monitoring Program, pp. 1-258, Sydney.

Blount, C, Roberts, C, Cummings, D, Pernice, M, Neilson, J & Nicastro, A 2013, Bimonthly Coral Monitoring Report: Dredging Report 2 − Ichthys Nearshore Environmental Monitoring Program, no. 2, pp. 1-126, Sydney.

Clayton, J & Sutherland, DL 2013, Waitaki Weeds Surveillance Plan, Hamilton, NZ.

de Winton, M, Sutherland, DL & Clayton, J 2013, Kākahi (freshwater mussel) survey of the Ō Tū Wharekai Lakes, Hamilton, NZ.

Pernice, M, Roberts, C & Nicastro, A 2013, Bimonthly Coral Monitoring Report: Dredging Report 5 − Ichthys Nearshore Environmental Monitoring Program., no. 5, pp. 1-204, Sydney.

Ralph, PJ & Sinutok, S AccessUTS Pty Limited 2013, Vallisneria and submerged macrophyte management in Penrith Lakes, Sydney.

Ralph, PJ, Skilbeck, G & Sinutok, S AccessUTS Pty Limited 2013, Vallisneria and submerged macrophyte management in the Penrith Lakes Scheme, Sydney.

Roberts, C, Pernice, M & Nicastro, A 2013, Bimonthly Coral Monitoring Report: Dredging Report 3 − Ichthys Nearshore Environmental Monitoring Program., no. 3, pp. 1-154, Sydney.

Roberts, C, Pernice, M & Nicastro, A 2013, Bimonthly Coral Monitoring Report: Dredging Report 4 − Ichthys Nearshore Environmental Monitoring Program., no. 4, pp. 1-177, Sydney.

Sutherland, D 2013, Risk posed by aquatic weed species to the Waitaki Catchment, Christchurch.

Sutherland, D & Taumoepaeu, A 2013, Lake Hood Aquatic Weed Survey, Christchurch.

Sutherland, D & Taumoepeau, A 2013, Macrophyte monitoring in Waituna Lagoon - February 2013, Christchurch.

Sutherland, D, Edwards, T, Wells, R & Kelly, G 2013, Assessment of the ecological condition of 8 Canterbury lakes using LakeSPI - and weed surveillance in 12 lakes, Christchurch.

Sutherland, D, Inder, F, Molineux, M, Kelly, G & Wells, R 2013, Monitoring the potential effects of MTAD on the Waiau Arm water quality and macrophytes: year one, Chritchurch.