Aaron, JE, Oliver, B, Clarke, N & Carter, DH 1999, 'Calcified microspheres as biological entities and their isolation from bone', Histochemical Journal, vol. 31, no. 7, pp. 455-470.
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Ajani, PA, Roberts, D, Smith, A & Krogh, M 1999, 'The effect of sewage discharge on two bioindicators at Port Stephens, NSW', Ecotoxicology, vol. 8, no. 4, pp. 253-267.
Ajani, PA, Roberts, DE, Smith, AK & Krogh, M 1999, 'The effect of sewage on two bioindicators at Port Stephens, New South Wales, Australia', Ecotoxicology, vol. 8, no. 4, pp. 253-267.
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Alonso, MA, Asatryan, AA & Forbes, GW 1999, 'Beyond the Fresnel approximation for focused waves', JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION, vol. 16, no. 8, pp. 1958-1969.
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By extension of the transitional operator method developed by Wunsche, the Rayleigh-Sommerfeld and Kirchhoff solutions to the diffraction of a converging spherical (or cylindrical) wave are expressed in terms of a series of derivatives of the field estim
Ammit, AJ, Kane, SA & Panettieri, RA 1999, 'Activation of K-p21ras and N-p21ras, but Not H-p21ras, Is Necessary for Mitogen-Induced Human Airway Smooth-Muscle Proliferation', American Journal of Respiratory Cell and Molecular Biology, vol. 21, no. 6, pp. 719-727.
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Asatryan, AA, Robinson, PA, Botten, LC, McPhedran, RC, Nicorovici, NA & de Sterke, CM 1999, 'Effects of disorder on wave propagation in two-dimensional photonic crystals', PHYSICAL REVIEW E, vol. 60, no. 5, pp. 6118-6127.
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The electromagnetic transmittance of disordered two-dimensional photonic crystals composed of circular cylinders is investigated as a function of wavelength and polarization. At short wavelengths, the transmittance shows a band structure similar to that
Asatryan, AA, Robinson, PA, Botten, LC, McPhedran, RC, Nicorovici, NA & Martijn de Sterke, C 1999, 'Effects of disorder on wave propagation in two-dimensional photonic crystals', Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics, vol. 60, no. 5, pp. 6118-6127.
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The electromagnetic transmittance of disordered two-dimensional photonic crystals composed of circular cylinders is investigated as a function of wavelength and polarization. At short wavelengths, the transmittance shows a band structure similar to that found in the optical absorption spectrum of amorphous semiconductors, with impurity states increasingly appearing on the long wavelength side of the band gaps as the degree of disorder is increased. In the long-wavelength limit, Anderson localization of waves is found, provided that the wavelength is not so large that the random photonic crystal can be viewed as homogeneous. The localization properties in this regime are studied and an analytic expression for the dependence of the localization length on wavelength is derived. In the limit of extremely long wavelengths, the system homogenizes and can be replaced by an equivalent one with uniform effective refractive index, whose form is derived for both polarizations. Analysis of the crossover between localization and homogenization is also presented. © 1999 The American Physical Society.
Ashton, PR, Boyd, SE, Brindle, A, Langford, SJ, Menzer, S, Pe´rez-García, L, Preece, JA, Raymo, IM, Spencer, N, Fraser Stoddart, J, White, AJP & Williams, DJ 1999, 'Diazapyrenium-containing catenanes and rotaxanes', New Journal of Chemistry, vol. 23, no. 6, pp. 587-602.
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Atkinson, R, Harper, PAW, Ryce, C, Morrison, DA & Ellis, JT 1999, 'Comparison of the biological characteristics of two isolates of Neospora caninum', PARASITOLOGY, vol. 118, pp. 363-370.
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This study compared the biological and genetic properties of a bovine (NC-SweB1) and a canine (NC-Liverpool) isolate of Neospora caninum. A mouse model for CNS infection demonstrated marked differences in pathogenicity between the isolates. NC-Liverpool
Bateman, JF, Freddi, S, Lamand�, SR, Byers, P, Nasioulas, S, Douglas, J, Otway, R, Kohonen-Corish, M, Edkins, E & Forrest, S 1999, 'Reliable and sensitive detection of premature termination mutations using a protein truncation test designed to overcome problems of nonsense-mediated mRNA instability', Human Mutation, vol. 13, no. 4, pp. 311-317.
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The protein truncation test (PTT) is a mutation-detection method used to scan for premature termination (nonsense) mutations. PCR amplification of the DNA or mRNA source material is performed using forward primers containing a T7-promoter sequence and translation initiation signals such that the resultant products can be transcribed and translated in vitro to identify the smaller truncated protein products. mRNA is commonly used as the source material, but success of the PTT and other RNA-based mutation detection methods can be severely compromised by nonsense mutation-induced mRNA decay, a well-documented process that is often overlooked in mutation detection strategies. In this study, we develop an RNA-based PTT that overcomes the problem of mRNA decay by preincubating cells with cycloheximide to stabilise the mutant mRNA. The effectiveness of this method for mutation detection in abundant mRNAs was demonstrated in osteogenesis imperfecta fibroblasts by the protection of type I collagen (COL1A1) mRNA containing nonsense mutations that normally resulted in mutant mRNA degradation. Stabilisation of mutant mismatch repair gene (MLH1) mRNA was also observed in transformed lymphocytes from patients with hereditary nonpolyposis colorectal cancer (HNPCC). Importantly, our strategy also stabilised very low-level (or illegitimate) nonsense-containing transcripts in lymphoblasts from patients with Bethlem myopathy (COL6A1), familial adenomatous polyposis (APC), and breast cancer (BRCA1). The greatly increased sensitivity and reliability of this RT-PCR/PTT protocol has broad applicability to the many genetic diseases in which only blood-derived cells may be readily available for analysis.
Bateman, JF, Freddi, S, Lamande, SR, Byers, P, Nasioulas, S, Douglas, J, Otway, R, Kohonen-Corish, M, Edkins, E & Forrest, S 1999, 'Reliable and sensitive detection of premature termination mutations using a protein truncation test designed to overcome problems of nonsense-mediated mRNA instability (vol 13, pg 311, 1998)', HUMAN MUTATION, vol. 14, no. 1, pp. 86-86.
Bateman, JF, Freddi, S, Lamande, SR, Byers, P, Nasioulas, S, Douglas, J, Otway, R, Kohonen-Corish, M, Edkins, E, Forrest, S & Solomon, E 1999, 'Corrigenda', Human Mutation, vol. 14, no. 1, pp. 86-86.
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Beebe, NW, Ellis, JT, Cooper, RD & Saul, A 1999, 'DNA sequence analysis of the ribosomal DNA ITS2 region for the Anopheles punctulatus group of mosquitoes', INSECT MOLECULAR BIOLOGY, vol. 8, no. 3, pp. 381-390.
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The internal transcribed spacer 2 (ITS2) from the ribosomal DNA was sequenced and characterized for ten cryptic species in the Anopheles punctulatus group, the members of which are major vectors of malaria and filariasis in the south-west Pacific. The le
Bergveld, HJ, Kruijt, WS & Notten, PHL 1999, 'Electronic-network modelling of rechargeable NiCd cells and its application to the design of battery management systems', Journal of Power Sources, vol. 77, no. 2, pp. 143-158.
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In the first part of this paper, the development of a simulation model for a sealed rechargeable NiCd cell is described. Based on the concept of this cell type, a mathematical description of the various physical and electrochemical processes occurring inside the cell can be given. Subsequently, these equations are introduced in the form of electronic components into an electronic-circuit simulator. This enables the user to simulate the most important cell characteristics like voltage, temperature and internal gas pressure simultaneously and coherently under a wide variety of charging, discharging and open-circuit conditions. The construction of the model enables the user to investigate the course of each of the various reactions taking place inside the cell. Moreover, the electrical and thermal interaction with the surrounding electronics attached to the cell and with other cells, e.g., in a battery pack, can also be simulated. In the second part of this paper, some examples of simulations of cell characeristics are presented. The results of the simulated phenomena show good qualitative agreement with measured cell characteristics. An understanding of phenomena such as charge efficiency, self-discharge and overdischarge is presented using the model. Simulation of battery behaviour in an electronic system enables a system designer to design the optimal Battery Management System around the battery. In the third part of this paper, an example of applying the model in an electronic system is given, i.e., a shaver. Also, simulations of several cells connected in series forming a battery or battery pack are described. © 1999 Elsevier Science S.A. All rights reserved.
Betensky, RA, Lindsey, JC, Ryan, LM & Wand, MP 1999, 'Local EM estimation of the hazard function for interval-censored data', BIOMETRICS, vol. 55, no. 1, pp. 238-245.
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We propose a smooth hazard estimator for interval-censored survival data using the method of local likelihood. The model is fit using a local EM algorithm. The estimator is more descriptive than traditional empirical estimates in regions of concentrated information and takes on a parametric flavor in regions of sparse information. We derive two different standard error estimates for the smooth curve, one based on asymptotic theory and the other on the bootstrap. We illustrate the local EM method for times to breast cosmesis deterioration (Finkelstein, 1986, Biometrics 42, 845-854) and for times to HIV-1 infection for individuals with hemophilia (Kroner et al., 1994, Journal of AIDS 7, 279-286). Our hazard estimates for each of these data sets show interesting structures that would not be found using a standard parametric hazard model or empirical survivorship estimates.
Bilodeau, P, Udvardi, MK, Peacock, WJ & Dennis, ES 1999, 'A prolonged cold treatment-induced cytochrome P450 gene from Arabidopsis thaliana', PLANT CELL AND ENVIRONMENT, vol. 22, no. 7, pp. 791-800.
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Booth, DJ & Hixon, MA 1999, 'Food ration and condition affect early survival of the coral reef damselfish, Stegastes partitus', OECOLOGIA, vol. 121, no. 3, pp. 364-368.
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The supply of larvae is a major determinant of population and community structure in coral reef fishes. However, spatial and temporal variation in condition (i.e. quality) of potential recruits, as well as their density (i.e. quantity), may influence sur
Braithwaite, DH, Holzapfel, C & Williams, DBG 1999, 'Stereoselective Thallium-induced Ring Contraction of Glycals', Journal of Chemical Research, no. 2, pp. 108-109.
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Brown, JJ, Diamond, ID, Chambers, RL, Buckner, LJ & Teague, AD 1999, 'A methodological strategy for a one‐number census in the UK', Journal of the Royal Statistical Society: Series A (Statistics in Society), vol. 162, no. 2, pp. 247-267.
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As a result of lessons learnt from the 1991 census, a research programme was set up to seek improvements in census methodology. Underenumeration has been placed top of the agenda in this programme, and every effort is being made to achieve as high a coverage as possible in the 2001 census. In recognition, however, that 100% coverage will never be achieved, the one- number census (ONC) project was established to measure the degree of underenumeration in the 2001 census and, if possible, to adjust fully the outputs from the census for that undercount. A key component of this adjustment process is a census coverage survey (CCS). This paper presents an overview of the ONC project, focusing on the design and analysis methodology for the CCS. It also presents results that allow the reader to evaluate the robustness of this methodology.
Bruce, D, Fu, SL, Armstrong, S & Dean, RT 1999, 'Human apo-lipoprotein B from normal plasma contains oxidised peptides', INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY, vol. 31, no. 12, pp. 1409-1420.
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Brumback, BA, Holmes, LB & Ryan, LM 1999, 'Adverse effects of chorionic villus sampling: a meta-analysis', STATISTICS IN MEDICINE, vol. 18, no. 16, pp. 2163-2175.
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Meta-analysis is a popular tool for combining evidence from several related studies. The technique is usually used to combine randomized clinical trials, case-control studies or prospective studies where each study has its own exposed and unexposed group
Brumback, BA, Ruppert, D & Wand, MP 1999, 'Comment', Journal of the American Statistical Association, vol. 94, no. 447, pp. 794-797.
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Brumback, BA, Ruppert, D & Wand, MP 1999, 'Variable Selection and Function Estimation in Additive Nonparametric Regression Using a Data-Based Prior: Comment', Journal of the American Statistical Association, vol. 94, no. 447, pp. 794-794.
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Canney, SA, Sashin, VA, Ford, MJ & Kheifets, AS 1999, 'Electronic band structure of magnesium and magnesium oxide: experiment and theory', JOURNAL OF PHYSICS-CONDENSED MATTER, vol. 11, no. 39, pp. 7507-7522.
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Electron momentum spectroscopy (EMS) has been used to measure the valence band electronic structure of thin magnesium and magnesium oxide films. The band structures have also been calculated within the linear muffin-tin orbital (LMTO) approximation. The free-electronlike parabola characteristic of metallic solids was observed for magnesium with a bandwidth of approximately 6 eV, in agreement with previous measurements. The inclusion of energy broadening due to finite hole-lifetime effects and a Monte Carlo simulation of multiple scattering events gives good agreement between calculated and measured band structures. However, we measure a much higher intensity due to plasmon excitation compared with the simulated intensity. Upon oxidation the valence structure splits into two distinct, less dispersive bands typical of an ionic solid. Intensity due to plasmon excitation was almost completely absent in the experimental spectra for magnesium oxide. The LMTO calculation reproduces the overall structure and dispersion range of the oxide. The measured and calculated energy gap between upper and lower valence bands and their relative intensities do not agree quantitatively. This discrepancy may be due to a contribution of magnesium s states to the predominantly oxygen p states in the upper band.
Carroll, R 1999, 'Nonparametric regression in the presence of measurement error', Biometrika, vol. 86, no. 3, pp. 541-554.
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Carroll, RJ, Roeder, K & Wasserman, L 1999, 'Flexible Parametric Measurement Error Models', Biometrics, vol. 55, no. 1, pp. 44-54.
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Carroll, RJ, Ruppert, D & Stefanski, LA 1999, 'Comment', Journal of the American Statistical Association, vol. 94, no. 446, pp. 410-411.
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Carroll, RJ, Ruppert, D & Stefanski, LA 1999, 'Regression Depth: Comment', Journal of the American Statistical Association, vol. 94, no. 446, pp. 410-410.
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Carter, JS, Bowden, FJ, Bastian, I, Myers, GM, Sriprakash, KS & Kemp, DJ 1999, 'Phylogenetic evidence for reclassification of Calymmatobacterium granulomatis as Klebsiella granulomatis comb. nov.', International Journal of Systematic and Evolutionary Microbiology, vol. 49, no. 4, pp. 1695-1700.
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Cavicchioli, R, Fegatella, F, Ostrowski, M, Eguchi, M & Gottschal, J 1999, 'Sphingomonads from marine environments', Journal of Industrial Microbiology and Biotechnology, vol. 23, no. 4-5, pp. 268-272.
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Chai, CS & Ben-Nissan, B 1999, 'Bioactive nanocrystalline sol-gel hydroxyapatite coatings', Journal of Materials Science: Materials in Medicine, vol. 10, no. 8, pp. 465-469.
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Sol-gel technology offers an alternative technique for producing bioactive surfaces for improved bone attachment. Previous work indicated that monophasic hydroxyapatite coatings were difficult to produce. In the present work hydroxyapatite was synthesize
Chedid, A, Ryan, LM, Dayal, Y, Wolf, BC & Falkson, G 1999, 'Morphology and Other Prognostic Factors of Hepatocellular Carcinoma', Archives of Pathology & Laboratory Medicine, vol. 123, no. 6, pp. 524-528.
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Abstract
Objective.—Hepatocellular carcinoma is a malignancy found worldwide that has typically poor prognosis despite treatment. Although several studies have dealt with prognostic factors, just a few detailed analyses of large series correlating the pathology of hepatocellular carcinoma with prognosis are available. The present study was undertaken to address this limitation.
Patients and Methods.—Our prior clinical study described 432 patients, but sufficient tissue was available for evaluation in only 299 patients. Of these, 224 samples contained primary hepatocellular carcinoma, while the remainder contained only metastatic tumor. Characteristics evaluated included degree of tumor differentiation, associated cirrhosis or hepatitis, presence of cytoplasmic inclusion bodies, and blood vessel invasion by the neoplasm.
Results.—Of the 224 patients, 71% were male, 65% white, and 73% over the age of 45 years. Ninety-one percent were from North America. A total of 42 patients were found to have cirrhosis. Thirty-five percent had cytoplasmic inclusion bodies, and 25% showed evidence of blood vessel invasion. Tumor response rates (tumor shrinkage) were low (8%) regardless of treatment. Presence of cytoplasmic eosinophilic inclusion bodies and blood vessel invasion were not associated with increased survival. Some histopathologies (pelioid, spindle cell, fibrolamellar) were associated with a better prognosis. Patients with a predominant trabecular pattern (43%) did particularly poorly. Although sex was significantly associated with survival using a univariate analysis, this effect disappeared in a multivariate Cox model that adjusted simultaneously for other factors.
Conclusion.—This investigation suggests that histologic subtype and clinical features may provide useful prognostic information in hepatocellular carcinoma. Poore...
Cho, S-I, Li, Q, Yang, J, Chen, C, Padungtod, C, Ryan, L, Christiani, DC & Xu, X 1999, 'Drinking Water Source and Spontaneous Abortion: A Cross-sectional Study in a Rural Chinese Population', International Journal of Occupational and Environmental Health, vol. 5, no. 3, pp. 164-169.
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The authors examined the association between the risk of spontaneous abortion and the type of drinking water source in a rural Chinese population. Information about pregnancy outcomes and various exposures was collected by means of a detailed interview questionnaire. 2,876 pregnancies occurring in 1989-1993 among 2,201 nonsmoking and non-alcohol-drinking women were analyzed by logistic regression. Generalized estimating equations were used to adjust for correlations between multiple pregnancies in the same woman. The use of pond water as a drinking water source was associated with a higher risk of spontaneous abortion than the use of well or river water (odds ratio, 1.63; 95% confidence interval, 1.11 to 2.39), adjusting for potential confounders. More studies are needed to identify the agents responsible for the observed association. The results of this study emphasize the importance of monitoring potential drinking-water contamination in communities.
Christen, G, Stevens, G, Lukins, PB, Renger, G & Larkum, AWD 1999, 'Isolation and characterisation of oxygen evolving thylakoids from the marine prokaryoteProchloron didemni', FEBS Letters, vol. 449, no. 2-3, pp. 264-268.
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The present study describes the first successful attempt to isolate oxygen evolving thylakoids and thylakoid fragments from the marine prokaryote Prochloron didemni, a member of the recently discovered group of prochlorophytes. Oxygen evolving thylakoid membranes and fragments were isolated from seawater suspended cells of Prochloron didemni by passage of the cells through a Yeda press and subsequent differential centrifugation of the broken material. Three fractions were collected at 1000xg, 5000xg, and 30 000xg and identified by light microscopy as cells (and their fragments), thylakoids and membrane fragments, respectively. Pigment content, oxygen evolution rate and 77 K fluorescence spectra of these fractions were virtually identical. This finding indicates that the membrane fragments obtained are not enriched in photosystem II. The P680(+.) reduction kinetics of thylakoid membrane fragments were determined by monitoring flash induced absorption changes at 830 nm and analysing the time course of their decay. The multiphasic relaxation kinetics and their modification by NH2OH were found to be similar to those observed in cyanobacteria and plants. These findings provide an independent line of evidence for the idea of a high conservation of the basic structural and functional pattern of the water oxidising complex in all organisms that perform oxygenic photosynthesis. Copyright (C) 1999 Federation of European Biochemical Societies.
Christiani, DC, Ye, T, Zhang, S, Wegman, DH, Eisen, EA, Ryan, LA, Olenchock, SA, Pothier, L & Dai, H 1999, 'Cotton dust and endotoxin exposure and long-term decline in lung function: Results of a longitudinal study', AMERICAN JOURNAL OF INDUSTRIAL MEDICINE, vol. 35, no. 4, pp. 321-331.
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Combes, V, Simon, A-C, Grau, G-E, Arnoux, D, Camoin, L, Sabatier, F, Mutin, M, Sanmarco, M, Sampol, J & Dignat-George, F 1999, 'In vitro generation of endothelial microparticles and possible prothrombotic activity in patients with lupus anticoagulant', Journal of Clinical Investigation, vol. 104, no. 1, pp. 93-102.
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Comolli, JC, Hauser, AR, Waite, L, Whitchurch, CB, Mattick, JS & Engel, JN 1999, 'Pseudomonas aeruginosa gene products PilT and PilU are required for cytotoxicity in vitro and virulence in a mouse model of acute pneumonia', INFECTION AND IMMUNITY, vol. 67, no. 7, pp. 3625-3630.
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Type TV pill of the opportunistic pathogen Pseudomonas aeruginosa mediate twitching motility and act as receptors for bacteriophage infection. They are also important bacterial adhesins, and nonpiliated mutants of P. aeruginosa have been shown to cause l
Craddock, M, Heath, D & Platen, E 1999, 'Numerical Inversion of Laplace Transforms: A Survey of Techniques with Applications to Derivative Pricing', Journal of Computational Finance, vol. 4, no. 1, pp. 57-81.
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We consider different approaches to the problem of numerically inverting Laplace transforms in finance. In particular, we discuss numerical inversion techniques in the context of Asian option
pricing.
Dahia, P 1999, 'PTEN is inversely correlated with the cell survival factor Akt/PKB and is inactivated via multiple mechanismsin haematological malignancies', Human Molecular Genetics, vol. 8, no. 2, pp. 185-193.
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Davies, MJ, Fu, SL, Wang, HJ & Dean, RT 1999, 'Stable markers of oxidant damage to proteins and their application in the study of human disease', FREE RADICAL BIOLOGY AND MEDICINE, vol. 27, no. 11-12, pp. 1151-1163.
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Davison, HC, Guy, F, Trees, AJ, Ryce, C, Ellis, JT, Otter, A, Jeffrey, M, Simpson, VR & Holt, JJ 1999, 'In vitro isolation of Neospora caninum from a stillborn calf in the UK', RESEARCH IN VETERINARY SCIENCE, vol. 67, no. 1, pp. 103-105.
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Neospora caninum was isolated in Vero cell culture from the brain of a stillborn calf. This isolate (designated NC-LiVB1) is the first to be obtained from cattle in the United Kingdom and was confirmed as N. caninum by immunofluorescence with specific an
De Lucca, S, Sporik, R, O’Meara, TJ & Tovey, ER 1999, 'Mite allergen (Der p 1) is not only carried on mite feces', Journal of Allergy and Clinical Immunology, vol. 103, no. 1, pp. 174-175.
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De Lucca, SD, Taylor, DJM, O’Meara, TJ, Jones, AS & Tovey, ER 1999, 'Measurement and characterization of cockroach allergens detected during normal domestic activity', Journal of Allergy and Clinical Immunology, vol. 104, no. 3, pp. 672-680.
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Background: Cockroach allergen is recognized as a causal factor for asthma. However, airborne cockroach allergen has not been detected in undisturbed conditions, and therefore the behavior and properties of airborne cockroach allergen have been poorly characterized. A new aeroallergen sampling method and sensitive system of immunoassay have been used to examine cockroach allergen exposure. Objective: Our purpose was to measure and characterize airborne cockroach allergens during normal domestic exposure in the homes of Sydney, Australia. Methods: Air sampling with Institute of Occupational Medicine, Edinburgh (IOM) samplers was performed in the living rooms of 10 houses during low- and no-disturbance environments. In addition, inhaled particles were collected by each home occupant during low domestic exposure with use of intra-nasal samplers that impact particles onto an adhesive surface. The particles collected on the IOMs and the intranasal samplers were immunostained with Bla g 1 monoclonal antibodies. Particle size, morphologic characteristics, and the relative Bla g 1 content of particles were estimated. Reservoir dust samples from the kitchen, living room, and bedroom were assayed by an ELISA. Two forms of repeatability of IOM air sampling were examined. The first measure tested the repeatability of 2 IOM samples collected simultaneously in the same room during low- and no-disturbance activities. The second measure examined the repeatability of IOM sampling over time on 10 consecutive days. Results: Bla g 1 was detected in reservoir dust samples taken from all homes (geometric mean 1.5 U/g, range 0.2-9.4 U/g). Inhaled particles containing Bla g 1 were detected during 1 hour of intra-nasal sampling in 8 of 10 homes during low disturbance. Cockroach particles were detected on all of the IOM samples collected for both 4-hour low-disturbance and overnight no-disturbance sampling environments. Particles containing Bla g 1 collected with the IOM samplers during l...
Decroocq, V, Zhu, XM, Kauffman, M, Kyozuka, J, Peacock, WJ, Dennis, ES & Llewellyn, DJ 1999, 'A TM3-like MADS-box gene from Eucalyptus expressed in both vegetative and reproductive tissues', GENE, vol. 228, no. 1-2, pp. 155-160.
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Delatycki, MB, Paris, DBBP, Gardner, RJM, Nicholson, GA, Nassif, N, Storey, E, MacMillan, JC, Collins, V, Williamson, R & Forrest, SM 1999, 'Clinical and genetic study of Friedreich ataxia in an Australian population', American Journal of Medical Genetics, vol. 87, no. 2, pp. 168-174.
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Delatycki, MB, Paris, DBBP, Gardner, RJMK, Nicholson, GA, Nassif, N, Storey, E, Macmillan, JC, Collins, V, Williamson, R & Forrest, SM 1999, 'Clinical and genetic study of friedreich ataxia in an Australian population', American Journal of Medical Genetics, vol. 87, no. 2, pp. 168-174.
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Friedreich ataxia is an autosomal recessive disorder caused by mutations in the FRDA gene that encodes a 210-amino acid protein called frataxin. An expansion of a GAA trinucleotide repeat in intron 1 of the gene is present in more than 95% of mutant alleles. Of the 83 people we studied who have mutations in FRDA, 78 are homozygous for an expanded GAA repeat; the other five patients have an expansion in one allele and a point mutation in the other. Here we present a detailed clinical and genetic study of a subset of 51 patients homozygous for an expansion of the GAA repeat. We found a correlation between the size of the smaller of the two expanded alleles and age at onset, age into wheelchair, scoliosis, impaired vibration sense, and the presence of foot deformity. There was no significant correlation between the size of the smaller allele and cardiomyopathy, diabetes mellitus, loss of proprioception, or bladder symptoms. The larger allele size correlated with bladder symptoms and the presence of foot deformity. The duration of disease is correlated with wheelchair use and the presence of diabetes, scoliosis, bladder symptoms and impaired proprioception, and vibration sense but no other complications studied.
Djordjevic, SP, Smith, LA, Forbes, WA & Hornitzky, MA 1999, 'Geographically diverse Australian isolates ofMelissococcus plutonexhibit minimal genotypic diversity by restriction endonuclease analysis', FEMS Microbiology Letters, vol. 173, no. 2, pp. 311-318.
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Doble, P & Haddad, PR 1999, 'Indirect photometric detection of anions in capillary electrophoresis', Journal of Chromatography A, vol. 834, no. 1-2, pp. 189-212.
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Indirect photometric detection (absorbance and fluorescence) of anions by capillary electrophoresis is reviewed. Factors which influence the displacement process of analyte ions in background electrolytes containing one or more co-ions are discussed and
Doble, P & Haddad, PR 1999, 'Use of electrolytes containing multiple co-anions in the analysis of anions by capillary electrophoresis using indirect absorbance detection', ANALYTICAL CHEMISTRY, vol. 71, no. 1, pp. 15-22.
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Background electrolytes (BGEs) containing more than one W-absorbing probe co-anion were investigated as possible means to control peak symmetries and improve the sensitivity of indirect detection in the separation of a mixture of inorganic and organic an
Doblin, MA, Blackburn, SI & Hallegraeff, GM 1999, 'Comparative study of selenium requirements of three phytoplankton species: Gymnodinium catenatum, Alexandrium minutum (Dinophyta) and Chaetoceros cf. tenuissimus (Bacillariophyta)', JOURNAL OF PLANKTON RESEARCH, vol. 21, no. 6, pp. 1153-1169.
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This study investigated the selenium (Se) requirements of three phytoplankton species which commonly bloom in southern Australian estuaries. The present study showed that the toxic dinoflagellate Gymnodinium catenatum Graham had an obligate requirement f
Doblin, MA, Blackburn, SI & Hallegraeff, GM 1999, 'Growth and biomass stimulation of the toxic dinoflagellate Gymnodinium catenatum (Graham) by dissolved organic substances', JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY, vol. 236, no. 1, pp. 33-47.
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Blooms of the toxic dinoflagellate Gymnodinium catenatum are annually recurrent events in south-east Tasmanian waters. Extensive blooms are preceded by a rainfall trigger and the associated influx of dissolved organic matter (DOM; otherwise known as humi
Donnelly, S, Loscher, C, Mills, KHG & Lynch, MA 1999, 'Glycerol-induced seizure: involvement of IL-1 beta and glutamate', NEUROREPORT, vol. 10, no. 9, pp. 1821-1825.
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Dooley, AH & Gupta, SK 1999, 'The contraction of S2p-1 to Hp-1', MONATSHEFTE FUR MATHEMATIK, vol. 128, no. 3, pp. 237-253.
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Dooley, AH & Wildberger, NJ 1999, 'Global character formulae for compact Lie groups', TRANSACTIONS OF THE AMERICAN MATHEMATICAL SOCIETY, vol. 351, no. 2, pp. 477-495.
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Dooley, AH & Zhang, G 1999, 'Spherical functions on harmonic extensions ofH-type groups', The Journal of Geometric Analysis, vol. 9, no. 2, pp. 247-255.
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We consider the harmonic extension AN of an H-type group N with Lie algebra n = v + 3, and [v, v] = 3. We characterize the positive definite spherical functions on AN. © 1999 The Journal of Geometric Analysis.
dos Remedies, NJ, Ramsland, PA, Hook, JW & Raison, RL 1999, 'Identification of a homologue of CD59 in a cyclostome: implications for the evolutionary development of the complement system', DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY, vol. 23, no. 1, pp. 1-14.
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We have employed a COS cell expression cloning procedure to isolate a full length cDNA clone encoding a hagfish leukocyte-associated membrane protein (HLMP1). The protein. which is identified by a monoclonal antibody (JB3) generated in our laboratory, is
Dowd, A, Elliman, RG, Samoc, M & Luther-Davies, B 1999, 'Nonlinear optical response of Ge nanocrystals in a silica matrix', APPLIED PHYSICS LETTERS, vol. 74, no. 2, pp. 239-241.
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Time-resolved degenerate-four-wave-mixing measurements were used to study the nonlinear optical response (intensity-dependent refractive index! of Ge nanocrystallites embedded in a silica matrix. Nanocrystals were fabricated by ion-implanting silica with
Dowd, A, Samoc, M, Luther-Davies, B & Elliman, RG 1999, 'Nonlinear optical properties of semiconducting nanocrystals in fused silica', NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION B-BEAM INTERACTIONS WITH MATERIALS AND ATOMS, vol. 148, no. 1-4, pp. 964-968.
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Degenerate four-wave mixing (DFWM) is used to examine the nonlinear optical response of Ge nanocrystals in a silica matrix. The nanocrystals are formed by implanting 1.0 MeV Ge ions into silica to a dose of 3.0x10(17) Ge cm(-2) and annealing at 1100 degr
Duggin, IG, Andersen, PA, Smith, MT, Wilce, JA, King, GF & Wake, RG 1999, 'Site-directed mutants of RTP of Bacillus subtilis and the mechanism of replication fork arrest', JOURNAL OF MOLECULAR BIOLOGY, vol. 286, no. 5, pp. 1325-1335.
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DNA replication fork arrest during the termination phase of chromosome replication in Bacillus subtilis is brought about by the replication terminator protein (RTP) bound to speci®c DNA terminator sequences (Ter sites) distributed throughout the terminus region. An attractive suggestion by others was that crucial to the functioning of the RTP-Ter complex is a speci®c interaction between RTP positioned on the DNA and the helicase associated with the approaching replication fork. In support of this was the behaviour of two site-directed mutants of RTP. They appeared to bind Ter DNA normally but were ineffective in fork arrest as ascertained by in vitro Escherichia coli DnaB helicase and replication assays. We describe here a system for assessing the fork-arrest behaviour of RTP mutants in a bona ®de in vivo assay in B. subtilis. One of the previously studied mutants, RTP.Y33N, was non-functional in fork arrest in vivo, as predicted. But through extensive analyses, this RTP mutant was shown to be severely defective in binding to Ter DNA, contrary to expectation.
Ellis, JT, McMillan, D, Ryce, C, Payne, S, Atkinson, R & Harper, PAW 1999, 'Development of a single tube nested polymerase chain reaction assay for the detection of Neospora caninum DNA', INTERNATIONAL JOURNAL FOR PARASITOLOGY, vol. 29, no. 10, pp. 1589-1596.
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Sensitive detection techniques are required to study the life cycle of Neospora caninum and to diagnose infections, In this study, we describe the development of a PCR assay for N. caninum based on two successive amplification steps within a single tube.
Ellis, JT, Morrison, DA, Liddell, S, Jenkins, MC, Mohammed, OB, Ryce, C & Dubey, JP 1999, 'The genus Hammondia is paraphyletic', PARASITOLOGY, vol. 118, pp. 357-362.
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The phylogenetic relationships amongst Hammondia, Neospora and Toxoplasma were investigated by DNA sequence comparisons of the D2perD3 domain of the large subunit ribosomal DNA and the internal transcribed spacer 1. The results obtained allow us to rejec
Ellis, MH, Dennis, ES & Peacock, WJ 1999, 'Arabidopsis roots and shoots have different mechanisms for hypoxic stress tolerance', PLANT PHYSIOLOGY, vol. 119, no. 1, pp. 57-64.
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Evans, LA & Alvarez, R 1999, 'Characterization of the calcium biomineral in the radular teeth of Chiton pelliserpentis', JBIC Journal of Biological Inorganic Chemistry, vol. 4, no. 2, pp. 166-170.
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The radula in a group of molluscan invertebrates, the chitons (Polyplacophora), is a ribbon-like apparatus used for feeding and which bears a series of distinctive mineralized teeth called the major lateral teeth. While some chiton species deposit only iron biominerals in these teeth, many others deposit both iron and calcium. In this study, the calcium biomineral in the teeth of one of the latter types of species, the Australian east- coast chiton, Chiton pelliserpentis, has been isolated and examined for the first time. Spectroscopic and crystallographic techniques have identified the biomineral as a carbonate-substituted apatite with significant fluoride substitution also likely. Fourier-transform infrared and laser Raman spectroscopy indicated that the carbonate content was less than that of either bovine tibia cortical bone or human tooth enamel. X-ray diffraction analysis showed the biomineral to be poorly crystalline due to small crystal size and appreciable anionic substitution. The lattice parameters were calculated to be a=9.382 Å and c=6.883 Å, which are suggestive of a fluorapatite material. It is postulated that structural and biochemical differences in the tooth organic matrix of different chiton species will ultimately determine if the teeth become partly calcified or iron mineralized only.
Fagan, PK, Hornitzky, MA, Bettelheim, KA & Djordjevic, SP 1999, 'Detection of Shiga-Like Toxin ( stx 1 and stx 2 ), Intimin ( eaeA ), and Enterohemorrhagic Escherichia coli (EHEC) Hemolysin (EHEC hlyA ) Genes in Animal Feces by Multiplex PCR', Applied and Environmental Microbiology, vol. 65, no. 2, pp. 868-872.
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ABSTRACT
A multiplex PCR was developed for the rapid detection of genes encoding Shiga toxins 1 and 2 (
stx
1
and
stx
2
), intimin (
eaeA
), and enterohemolysin A (
hlyA
) in 444 fecal samples derived from healthy and clinically affected cattle, sheep, pigs, and goats. The method involved non-solvent-based extraction of nucleic acid from an aliquot of an overnight culture of feces in EC (modified) broth. The detection limit of the assay for both fecal samples and pure cultures was between 18 and 37 genome equivalents.
stx
1
and
hlyA
were the most commonly encountered virulence factors.
Field, CD 1999, 'Mangrove rehabilitation: Choice and necessity', Hydrobiologia, vol. 413, pp. 47-52.
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The concept of mangrove ecosystem rehabilitation is considered. Four main reasons for rehabilitating mangroves are identified: conservation, landscaping, sustainable production and coastal protection. Practical aspects of mangrove rehabilitation, such as the causes of site degradation, site selection, source of seedlings and planting, monitoring and maintenance are then briefly mentioned. Future developments that may impact on mangrove ecosystem restoration such as the importance of biodiversity, biotechnology, ecological modelling, mapping, human ecology and data bases, are then briefly reviewed. Finally, the matter of choice and necessity is addressed.
Field, CD 1999, 'Rehabilitation of Mangrove Ecosystems: An Overview', Marine Pollution Bulletin, vol. 37, no. 8-12, pp. 383-392.
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The concept and goals of mangrove ecosystem rehabilitation are considered and contrasted with ideas of ecosystem restoration. Three reasons for mangrove rehabilitation: conservation and landscaping; multiple use systems for high sustainable yield and protection of coastal areas, are then examined in detail. In each case, the underlying philosophy and limitations are presented. The practical problems of site selection for mangrove planting and techniques for regenerating mangroves are then considered. Some comments and data are then offered on mangrove ecosystem rehabilitation that is being carried out world-wide. Comment is made on the paucity of information. The practice and importance of monitoring and maintaining rehabilitated mangrove ecosystems is then presented. Finally, there is a discussion on the future management and research needs of mangrove ecosystem rehabilitation.
Fischer, P & Platen, E 1999, 'Applications of the Balanced Method to Stochastic Differential Equations in Filtering', Monte Carlo Methods and Applications, vol. 5, no. 1, pp. 19-38.
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The paper studies the application of the balanced method in hidden Markov chain filtering, an important practical area that requires the strong numerical solution of stochstic differential
equations with multiplicative noise. Numerical experiments are conducted to enable comparisons between the balanced method and standard alternative methods in the context of filtering. Both the mean
global error and the sample path properties of the approximate solutions are compared in a numerical study.
Fleischer, K, Toth, M, Phillips, MR, Zou, J, Li, G & Chua, SJ 1999, 'Depth profiling of GaN by cathodoluminescence microanalysis', APPLIED PHYSICS LETTERS, vol. 74, no. 8, pp. 1114-1116.
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We present the results of a depth-resolved cathodoluminescence (CL) and transmission electron microscopy study of autodoped GaN grown on sapphire. Depth-resolved CL analysis can be used for depth profiling of the yellow luminescence (YL) center concentra
Furukawa, H, Carroll, RJ, Swift, HH & Steiner, DF 1999, 'Long-term elevation of free fatty acids leads to delayed processing of proinsulin and prohormone convertases 2 and 3 in the pancreatic beta-cell line MIN6.', Diabetes, vol. 48, no. 7, pp. 1395-1401.
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To explore the role of chronically elevated free fatty acids (FFAs) in the pathogenesis of the hyperproinsulinemia of type 2 diabetes, we have investigated the effect of FFAs on proinsulin processing and prohormone convertases PC2 and PC1/PC3 in MIN6 cells cultured in Dulbecco's modified Eagle's medium with or without 0.5 mmol/l FFA mixture (palmitic acid:oleic acid = 1:2). After 7 days of culture, the percent of proinsulin in FFA-exposed cells was increased (25.9 +/-0.3% intracellular and 75.4 +/- 1.2% in medium vs. 13.5 +/-0.2 and 56.2 +/- 4.1%, respectively, in control cells). The biosynthesis and secretion of proinsulin and insulin were analyzed by comparing the incorporation of [3H]Leu and [35S]Met. In pulse-chase studies, proinsulin-to-insulin conversion was inhibited, and proinsulin in the medium was increased by 50% after 3 h of chase, while insulin secretion was decreased by 50% after FFA exposure. Levels of cellular PC2 and PC3 analyzed by Western blotting were decreased by 23 and 15%, respectively. However, PC2, PC3, proinsulin, and 7B2 mRNA levels were not altered by FFA exposure. To test for an effect on the biosynthesis of PC2, PC3, proinsulin, and 7B2, a protein required for PC2 activation, MIN6 cells were labeled with [35S]Met for 10-15 min, followed by a prolonged chase. Most proPC2 was converted after 6 h of chase in control cells, but conversion was incomplete even after 6 h of chase in FFA-exposed MIN6 cells. Media from chase incubations showed that FFA-exposed cells secreted more proPC2 than controls. Similar inhibitory effects were noted on the processing of proPC3, proinsulin, and 7B2. In conclusion, prolonged exposure of beta-cells to FFAs may affect the biosynthesis and posttranslational processing of proinsulin, PC2, PC3, and 7B2, and thereby contribute to the hyperproinsulinemia of type 2 diabetes. The mechanism of inhibition of secretory granule processing by FFAs may be through changes in Ca2+ concentration, the pH in the secr...
Gail, MH, Pee, D & Carroll, R 1999, 'Kin-Cohort Designs for Gene Characterization', JNCI Monographs, vol. 1999, no. 26, pp. 55-60.
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BACKGROUND: In the kin-cohort design, a volunteer with or without disease (the proband) agrees to be genotyped, and one obtains information on the history of a disease in first-degree relatives of the proband. From these data, one can estimate the penetrance of an autosomal dominant gene, and this technique has been used to estimate the probability that Ashkenazi Jewish women with specific mutations of BRCA1 or BRCA2 will develop breast cancer. METHODS: We review the advantages and disadvantages of the kin-cohort design and focus on dichotomous outcomes, although a few results on time-to-disease onset are presented. We also examine the effects of violations of assumptions on estimates of penetrance. We consider selection bias from preferential sampling of probands with heavily affected families, misclassification of the disease status of relatives, violation of Hardy-Weinberg equilibrium, violation of the assumption that family members' phenotypes are conditionally independent given their genotypes, and samples that are too small to ensure validity of asymptotic methods. RESULTS and CONCLUSIONS: The kin-cohort design has several practical advantages, including comparatively rapid execution, modest reductions in required sample sizes compared with cohort or case-control designs, and the ability to study the effects of an autosomal dominant mutation on several disease outcomes. The design is, however, subject to several biases, including the following: selection bias that arises if a proband's tendency to participate depends on the disease status of relatives, information bias from inability of the proband to recall the disease histories of relatives accurately, and biases that arise in the analysis if the conditional independence assumption is invalid or if samples are too small to justify standard asymptotic approaches.
Gail, MH, Pee, D, Benichou, J & Carroll, R 1999, 'Designing studies to estimate the penetrance of an identified autosomal dominant mutation: Cohort, case-control, and genotyped-proband designs', GENETIC EPIDEMIOLOGY, vol. 16, no. 1, pp. 15-39.
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Garrett, Q, Garrett, RW & Milthorpe, BK 1999, 'Lysozyme sorption in hydrogel contact lenses', INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, vol. 40, no. 5, pp. 897-903.
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To examine the processes involved in formation of protein deposits on hydrogel contact lenses. METHODS: The adsorption and/or penetration of lysozyme on or into three types of contact lenses, etafilcon A, vifilcon A, and tefilcon, were investigated in vitro using a radiolabel-tracer technique, x-ray photoelectron spectroscopy, and laser scanning confocal microscopy. RESULTS: Binding of lysozyme to high-water-content, ionic contact lenses (etafilcon A and vifilcon A) was dominated by a penetration process. The extent of this penetration was a function of charge density of the lenses, so that there was a higher degree of penetration of lysozyme in etafilcon A than in vifilcon A lenses. In contrast, the binding of lysozyme to tefilcon lenses was a surface adsorption process. The adsorption and desorption kinetics showed similar trends to those found in human serum albumin (HSA) adsorption on lens surfaces. However, the extent of lysozyme adsorption on tefilcon is much higher than HSA adsorption, probably because of the self-association of lysozyme on the tefilcon lens surface. Furthermore, either penetration or adsorption of lysozyme involved reversible and irreversible processes and were both time dependent. CONCLUSIONS: Binding of lysozyme to hydrogel lenses involves surface adsorption or matrix penetration. These processes may be reversible or irreversible. The properties of the lens materials, such as charge density (ionicity) and porosity (water content) of the lenses, determine the type and rates of these processes.
Garrett, Q, Griesser, HJ, Milthorpe, BK & Garrett, RW 1999, 'Irreversible adsorption of human serum albumin to hydrogel contact lenses: a study using electron spin resonance spectroscopy', BIOMATERIALS, vol. 20, no. 14, pp. 1345-1356.
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Genger, RK, Kovac, KA, Dennis, ES, Peacock, WJ & Finnegan, EJ 1999, 'Multiple DNA methyltransferase genes in Arabidopsis thaliana', PLANT MOLECULAR BIOLOGY, vol. 41, no. 2, pp. 269-278.
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Gijbels, I, Pope, A & Wand, MP 1999, 'Understanding exponential smoothing via kernel regression', Journal of the Royal Statistical Society: Series B (Statistical Methodology), vol. 61, no. 1, pp. 39-50.
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Gladstone, W, Tawfiq, N, Nasr, D, Andersen, I, Cheung, C, Drammeh, H, Krupp, F & Lintner, S 1999, 'Sustainable use of renewable resources and conservation in the Red Sea and Gulf of Aden: issues, needs and strategic actions', OCEAN & COASTAL MANAGEMENT, vol. 42, no. 8, pp. 671-697.
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Gleeson, MT & Johnson, AM 1999, 'Physical characterisation of the plastid DNA in Neospora caninum', International Journal for Parasitology, vol. 29, no. 10, pp. 1563-1573.
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Gorrie, C, Duflou, J, Brown, J & Waite, PME 1999, 'Fatal head injury in children: a new approach to scoring axonal and vascular damage', Child's Nervous System, vol. 15, no. 6-7, pp. 322-328.
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As part of a multidisciplinary study of brain damage in children fatally injured in motor vehicle accidents, a simple method to quantify and visualise the distribution and extent of injury has been developed. Vascular and axonal injury were assessed usin
Greene, RW & Doyle, AE 1999, 'Toward a transactional conceptualization of oppositional defiant disorder: Implications for assessment and treatment', Clinical Child and Family Psychology Review, vol. 2, no. 3, pp. 129-148.
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The conceptualization and treatment of oppositional defiant disorder (ODD) has been characterized by surprising homogeneity. In this paper evidence is presented to underscore the heterogeneity within ODD, including research demonstrating (a) the distinction between reactive and proactive forms of aggression; (b) the importance of affective modulation and self-regulation, and associated cognitive skills, in the development of the skill of compliance; and (c) high levels of comorbidity between ODD and other disorders. The disparate pathways that give rise to oppositional behavior suggest that different children with ODD may require different forms of intervention. The necessity of a transactional conceptualization, of achieving a comprehensive understanding of the factors underlying the difficulties of individual children with ODD, and of matching intervention ingredients to the specific needs of different children and families is discussed.
Greene, RW, Biederman, J, Faraone, SV, Wilens, TE, Mick, E & Blier, HK 1999, 'Further Validation of Social Impairment as a Predictor of Substance Use Disorders: Findings From a Sample of Siblings of Boys With and Without ADHD', Journal of Clinical Child Psychology, vol. 28, no. 3, pp. 349-354.
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Examined predictors of substance use disorders in nonreferred siblings of boys with and without attention deficit hyperactivity disorder to further investigate whether previous findings documenting the role of social impairment in predicting substance use disorders would be replicated. Participants were comprehensively assessed at Time 1 and at 4-year follow-up. We found that social impairment was the sole significant predictor of alcohol and substance abuse and smoking after controlling for other variables previously shown to be predictors of substance use disorders. These results confirmed prior findings documenting the critical role of social impairment in predicting later substance use disorders.
Haddad, PR, Doble, P & Macka, M 1999, 'Developments in sample preparation and separation techniques for the determination of inorganic ions by ion chromatography and capillary electrophoresis', JOURNAL OF CHROMATOGRAPHY A, vol. 856, no. 1-2, pp. 145-177.
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A review is presented of sample preparation and separation techniques for the determination of inorganic ions by ion chromatography (IC) and capillary electrophoresis (CE). Emphasis has been placed on those sample treatment methods which are specific to
Harry, EJ, Rodwell, J & Wake, RG 1999, 'Co-ordinating DNA replication with cell division in bacteria: a link between the early stages of a round of replication and mid-cell Z ring assembly', Molecular Microbiology, vol. 33, no. 1, pp. 33-40.
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Spores of a thymine-requiring strain of Bacillus subtilis 168, which is also temperature sensitive for the initiation of chromosome replication, were germinated and allowed to grow out at the permissive temperature in a minimal medium containing no added thymine. Under these conditions, there was no or very limited progression into the elongation phase of the first round of replication. In a significant proportion of the outgrown cells, a Z ring formed precisely at mid-cell and over the centrally positioned nucleoid, leading eventually to the formation of a mature division septum. When initiation of the first round of replication was blocked through a temperature shift and with thymine present, the Z ring was positioned acentrally. The central Z ring that formed in the absence of thymine was blocked by the presence of a DNA polymerase III inhibitor. It is concluded that the very early stages of a round of replication (initiation plus possibly limited progression into the elongation phase) play a key role in the precise positioning of the Z ring at mid-cell and between replicating daughter chromosomes
Heath, D, Hurst, S & Platen, E 1999, 'Modelling the Stochastic Dynamics of Volatility for Equity Indices', Asia Pacific Financial Markets, vol. 8, pp. 179-195.
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The paper is based on the observations that stockk index returns of major equity markets are likely to be Student t distributed. It then develops a class of continuous time stochastic volatility
models that is consistent with such empirical findings. Furthermore, applying the criterion of local risk minimisation in an incomplete market setting, option prices are computed. Finally it is shown that
implied volatility smile and skew patterns of the type observed in the markets can be recovered from the resulting stochastic volatility model.
Helfrich, M, Ross, A, King, GC, Turner, AG & Larkum, AWD 1999, 'Identification of [8-vinyl]-protochlorophyllide a in phototrophic prokaryotes and algae: chemical and spectroscopic properties', Biochimica et Biophysica Acta (BBA) - Bioenergetics, vol. 1410, no. 3, pp. 262-272.
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[8-vinyl]-Protochlorophyllide a1 was isolated from a Prochloron sp. associated with the host ascidian, Lissoclinum patella. To obtain sufficient amounts for identification of the purified pigment, suitable extraction procedures and HPLC systems were developed. The structure was finally elucidated by UV-VIS and fluorescence spectroscopy, mass spectrometry and NMR (rotating-frame Overhauser enhancement spectroscopy). [8-vinyl]-Protochlorophyllide a was originally detected only as an intermediate in chlorophyll biosynthesis. Although its presence as a light-harvesting pigment was previously suggested in some prochlorophytes and eukaryotic algae, this is the first unequivocal demonstration of [8-vinyl]-protochlorophyllide a in an oxygenic phototroph. We also show that [8-vinyl]-protochlorophyllide a occurs in Prochloron species of four other ascidians as well as in Micromonas pusilla and Prochlorococcus marinus. The possible role of this pigment in photosynthesis is discussed. Copyright (C) 1999 Elsevier Science B.V.
Helliwell, CA, Poole, A, Peacock, WJ & Dennis, ES 1999, 'Arabidopsis ent-kaurene oxidase catalyzes three steps of gibberellin biosynthesis', PLANT PHYSIOLOGY, vol. 119, no. 2, pp. 507-510.
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Heness, GL, Ben-Nissan, B, Gan, LH & Mai, YW 1999, 'Development of a finite element micromodel for metal matrix composites', COMPUTATIONAL MATERIALS SCIENCE, vol. 13, no. 4, pp. 259-269.
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A finite element micromodel has been developed based on real microstructures. The method of modelling is unique in that displacements calculated from large-specimen models are used as boundary conditions to model more accurately at the microstructural le
Henry, BK, Atkin, OK, Farquhar, GD, Day, DA, Millar, AH & Menz, RI 1999, 'Calculation of the oxygen isotope discrimination factor for studying plant respiration', Functional Plant Biology, vol. 26, no. 8, pp. 773-773.
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Measurement of discrimination against 18O during dark
respiration in plants is currently accepted as the only reliable method of
estimating the partitioning of electrons between the cytochrome and
alternative pathways. In this paper, we review the theory of the technique and
its application to a gas-phase system. We extend it to include sampling
effects and show that the isotope discrimination factor,
D, is calculated as –dln(1 +
δ)/dlnO*, where δ is isotopic
composition of the substrate oxygen and
O*=[O2]/[N2]
in a closed chamber containing tissue respiring in the dark. It is not
necessary to integrate the expression but, if the integrated form is used, the
resultant regression should not be constrained through the origin. This is
important since any error in D will have significant
effects on the estimation of the flux of electrons through the two pathways.
Holden, MTG, Ram Chhabra, S, De Nys, R, Stead, P, Bainton, NJ, Hill, PJ, Manefield, M, Kumar, N, Labatte, M, England, D, Rice, S, Givskov, M, Salmond, GPC, Stewart, GSAB, Bycroft, BW, Kjelleberg, S & Williams, P 1999, 'Quorum-sensing cross talk: isolation and chemical characterization of cyclic dipeptides from Pseudomonas aeruginosa and other Gram-negative bacteria', Molecular Microbiology, vol. 33, no. 6, pp. 1254-1266.
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Holmdahl, OJM, Morrison, DA, Ellis, JT & Huong, LTT 1999, 'Evolution of ruminant Sarcocystis (Sporozoa) parasites based on small subunit rDNA sequences', MOLECULAR PHYLOGENETICS AND EVOLUTION, vol. 11, no. 1, pp. 27-37.
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We present an evolutionary analysis of 13 species of Sarcocystis, including 4 newly sequenced species with ruminants as their intermediate host, based on complete small subunit rDNA sequences. Those species with ruminants as their intermediate host form
Hong, MY, Chapkin, RS, Wild, CP, Morris, JS, Wang, N, Carroll, RJ, Turner, ND & Lupton, JR 1999, 'Relationship between DNA adduct levels, repair enzyme, and apoptosis as a function of DNA methylation by azoxymethane.', Cell Growth Differ, vol. 10, no. 11, pp. 749-758.
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DNA alkylating agent exposure results in the formation of a number of DNA adducts, with O6-methyl-deoxyguanosine (O6-medG) being the major mutagenic and cytotoxic DNA lesion. Critical to the prevention of colon cancer is the removal of O6-medG DNA adducts, either through repair, for example, by O6-alkylguanine-DNA alkyltransferase (ATase) or targeted apoptosis. We report how rat colonocytes respond to administration of azoxymethane (a well-characterized experimental colon carcinogen and DNA-methylating agent) in terms of O6-medG DNA adduct formation and adduct removal by ATase and apoptosis. Our results are: (a) DNA damage is greater in actively proliferating cells than in the differentiated cell compartment; (b) expression of the DNA repair enzyme ATase was not targeted to the proliferating cells or stem cells but rather is confined primarily to the upper portion of the crypt; (c) apoptosis is primarily targeted to the stem cell and proliferative compartments; and (d) the increase in DNA repair enzyme expression over time in the bottom one-third of the crypt corresponds with the decrease in apoptosis in this same crypt region.
Hurst, JK, Wormell, P, Reimers, JR & Lacey, AR 1999, 'Nature of nonbonding molecular orbitals: Application to two symmetric tetraazanaphthalenes', JOURNAL OF PHYSICAL CHEMISTRY A, vol. 103, no. 16, pp. 3089-3096.
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Hurst, SR, Platen, E & Rachev, ST 1999, 'Option pricing for a logstable asset price model', MATHEMATICAL AND COMPUTER MODELLING, vol. 29, no. 10-12, pp. 105-119.
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The paper generalises the celebrated Black and Scholes [1] European option pricing formula for a class of logstable asset price models. The theoretical option prices have the potential to explain the implied volatility smiles evident in the market. (C) 1
Hutter, MC, Hughes, JM, Reimers, JR & Hush, NS 1999, 'Modeling the bacterial photosynthetic reaction center. 2. A combined quantum mechanical molecular mechanical study of the structure of the cofactors in the reaction centers of purple bacteria', JOURNAL OF PHYSICAL CHEMISTRY B, vol. 103, no. 23, pp. 4906-4915.
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Hyde, GJ, Davies, D, Perasso, L, Cole, L & Ashford, AE 1999, 'Microtubules, but not actin microfilaments, regulate vacuole motility and morphology in hyphae of Pisolithus tinctorius', Cell Motility and the Cytoskeleton, vol. 42, no. 2, pp. 114-124.
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Hyde, GJ, Davies, D, Perasso, L, Cole, L & Ashford, AE 1999, 'Microtubules, but not actin microfilaments, regulate vacuole motility and morphology in hyphae ofPisolithus tinctorius', Cell Motility and the Cytoskeleton, vol. 42, no. 2, pp. 114-124.
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Ian R., W, Andrew M., M, Mark G., H & Samoc, M 1999, 'Organometallic Complexes in Nonlinear Optics II: Third-Order Nonlinearities and Optical Limiting Studies', Advances In Organometallic Chemistry, Vol 43, vol. 43, pp. 349-405.
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NA
Ingman, KA, Ollendick, TH & Akande, A 1999, 'Cross-cultural aspects of fears in African children and adolescents', Behaviour Research and Therapy, vol. 37, no. 4, pp. 337-345.
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The purpose of this study was to compare level and type of fears in Nigerian and Kenyan children using the Fear Survey Schedule for Children, Revised (FSSC-R; [Ollendick, T.H. (1983). Reliability and validity of the Revised Fear Survey Schedule for Children (FSSC-R). Behaviour Research and Therapy, 21, 685-692.]). A total of 852 males and females between the ages of 8 and 17 were surveyed. Results indicated that Nigerian children reported significantly higher total fear than Kenyan children and that scores from both countries were higher than those found in the United States, Australia and China. This suggests that the cultures of Kenya and Nigeria may share a common variable that makes reporting of fears greater than that reported by children of other world cultures. In addition, Christian children in both countries reported higher levels of fear on several factors than Muslim children, indicating that Islamic beliefs may encourage children to report less fear or to deal with their fears better than Christian beliefs. Finally, children between the ages of 8 and 12 reported greater fear of the unknown than children between 13 and 17 years of age. Overall, these findings suggest that important cultural, religious and age differences exist for levels of childhood fears reported in Nigeria and Kenya. Copyright (C) 1999 Elsevier Science Ltd.
Iturria, SJ, Carroll, RJ & Firth, D 1999, 'Polynomial Regression and Estimating Functions in the Presence of Multiplicative Measurement Error', Journal of the Royal Statistical Society: Series B (Statistical Methodology), vol. 61, no. 3, pp. 547-561.
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Jarrard, DF, Sarkar, S, Shi, Y, Yeager, TR, Magrane, G, Kinoshita, H, Nassif, N, Meisner, L, Newton, MA, Waldman, FM & Reznikoff, CA 1999, 'p16/pRb pathway alterations are required for bypassing senescence in human prostate epithelial cells.', Cancer Res, vol. 59, no. 12, pp. 2957-2964.
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The cell cycle regulatory genes p16/CDKN2 and RB are frequently deleted in prostate cancers. In this study, we examined the role of alterations in p16 and pRb during growth, senescence, and immortalization in vitro of human prostate epithelial cells (HPECs). HPECs are established from normal prostate tissues and cultured on collagen-coated dishes. Our results show that p16 is reproducibly elevated at senescence in HPECs. HPECs are immortalized using human papilloma virus 16 E6 and/or E7 as molecular tools to inactivate p53 and/or pRb, respectively. Immortalization occurs infrequently in this system and only after a latent period during which additional genetic/epigenetic changes are thought to occur. Notably, all of the E6-immortalized HPEC lines but none of the E7 lines show inactivation of p16/CDKN2 (by deletion, methylation, or mutation) in association with immortalization. In contrast, E7 lines, in which pRb function is abrogated by E7 binding, retain the high levels of p16 observed at senescence. Thus, all lines show either a p16 or pRb inactivation. Analysis of six independent lines from metastatic prostate cancers reveals a similar loss of either p16 or pRb. Comparative genomic hybridization of HPECs shows that gains of chromosomes 5q, 8q, and 20 are nonrandomly associated with bypassing senescence (probability = 0.95). These results suggest that high levels of the cyclin-dependent kinase inhibitor p16 mediate senescence G1 arrest in HPECs and that bypassing this block by a p16/pRb pathway alteration is required for immortalization in vitro and possibly tumorigenesis in vivo. Our results further indicate that inactivation of the p16/pRb pathway alone is not sufficient to immortalize HPECs and that additional genetic alterations are required for this process.
Jenkins, MC, Ellis, JT, Liddell, S, Ryce, C, Munday, BL, Morrison, DA & Dubey, JP 1999, 'The relationship of Hammondia hammondi and Sarcocystis mucosa to other heteroxenous cyst-farming coccidia as inferred by phylogenetic analysis of the 18S SSU ribosomal DNA sequence', PARASITOLOGY, vol. 119, pp. 135-142.
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The complete sequence of the 18S small subunit (SSU) ribosomal DNA of Hammondia hammondi and Sarcocystis mucosa was obtained and compared to SSU rDNA sequences of Neospora caninum, Toxoplasma gondii, Besnoitia besnoiti, 2 species of Frenkelia, 3 species
Jiang, L, Huang, Y, Yuasa, T, Hunyor, S & dos Remedios, CG 1999, 'Elevated DNase activity and caspase expression in association with apoptosis in failing ischemic sheep left ventricles', Electrophoresis, vol. 20, no. 10, pp. 2046-2052.
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We examined the DNase activity as well as the expression of the caspases in left ventricles of failing sheep hearts and compared it with samples from normal controls. The sheep model of chronic ischemic heart failure was developed by intracoronary microembolisation. Moderate heart failure was defined as a decrease of left ventricular (LV) ejection fraction (EF) to 35% or less and was stable for four weeks after the last embolisation. The failing hearts were harvested from these animals six months later. Bovine pancreas DNase I was used as a standard for the DNase zymograms. In normal sheep left ventricles, a low level of the DNase I-like activity was detected (1.16 ± 0.17 pg/100 μg protein, n = 20), whereas it was elevated (3.64 ± 0.49 pg/100 μg, n = 32, p < 0.001) in the ischemic failing LV samples. The identity of the DNase in sheep is yet to be fully characterised. However, we also detected the expression of caspase-2 and caspase-3 by Western blotting. There was a 2.2-fold increased expression of caspase-2 p < 0.001= and a 2.6- fold increased expression of caspase-3 p < 0.001) in failing left ventricles compared to normal samples.
Johnson, KA, Rogers, GJ, Roe, SC, Howlett, CR, Clayton, MK, Milthorpe, BK & Schindhelm, K 1999, 'Nitrous acid pretreatment of tendon xenografts cross-linked with glutaraldehyde and sterilized with gamma irradiation', BIOMATERIALS, vol. 20, no. 11, pp. 1003-1015.
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Johnson, MS, Broady, KW & Johnson, AM 1999, 'Differential recognition of Toxoplasma gondii recombinant nucleoside triphosphate hydrolase isoforms by naturally infected human sera', INTERNATIONAL JOURNAL FOR PARASITOLOGY, vol. 29, no. 12, pp. 1893-1905.
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Toxoplasma gondii possesses a highly active nucleoside triphosphate hydrolase, which has been shown to be an immunodominant antigen in mice and humans. Two isoforms (I and II) which exhibit different activities with respect to hydrolysis of ATP exist. Past studies suggest that all strains of T. gondii contain the less active nucleoside triphosphate hydrolase II, whilst only virulent strains contain the nucleoside triphosphate hydrolase I isoform. In order to further investigate the correlation between nucleoside triphosphate hydrolase isoform and biological significance, we cloned and expressed as glutathione S-transferase fusion proteins the full-length nucleoside triphosphate hydrolase I and II isoforms and two truncations of the nucleoside triphosphate hydrolase I isoform in Escherichia coli. We then used ELISAs with the full-length recombinant nucleoside triphosphate hydrolases as antigens to examine 188 naturally infected T. gondii-positive sera and 83 T. gondii-negative sera for antibody reactivity. All positive sera reacted to T. gondii whole tachyzoite lysate antigen, 31 sera reacted to both nucleoside triphosphate hydrolase isoforms, three sera reacted specifically to nucleoside triphosphate hydrolase I and two sera reacted to only nucleoside triphosphate hydrolase II. Immunoblot analysis of the five sera reacting to either nucleoside triphosphate hydrolase I or II revealed both quantitative and qualitative differences in reactivity to the two isoforms. Comparative immunoblot analysis using the truncations of the nucleoside triphosphate hydrolase I isoform, and one of these positive sera identified a presumptive differential epitope between the nucleoside triphosphate hydrolase I and II isoforms within an 81-aa region (aa 445-526) at the C-terminus of the nucleoside triphosphate hydrolase I isoform. This differential reactivity was further localised to the 12-residue region of greatest variability between the two isoforms (residues 488-499) using synthet...
Johnson, MS, Broady, KW & Johnson, AM 1999, 'Studies on epitope recognition of the toxoplasma nucleoside triphosphate hydrolase', Journal of Protozoology Research, vol. 9, no. 4, pp. 135-141.
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The nucleoside triphosphate hydrolase (NTPase) of Toxoplasma gondii demonstrates an unusually high level of ATP hydrolysis, which, among the apicomplexan parasites, has only been observed in T. gondii and the closely related Neospora caninum. In T. gondii, NTPase has been shown to be highly expressed (constituting up to 8% of the tachyzoite protein) and is an immunodominant antigen in mice and humans. Two isoforms exist - NTPasel and NTPasell. NTPasel demonstrates a 4.5 fold greater activity than NTPasell with respect to ATP hydrolysis. Past studies suggest that only virulent strains possess the highly active NTPasel isoform. We have recently identified a B cell epitope (aa 484-502) on the NTPase isoforms which, despite some cross reactivity, is differentially recognised by a naturally infected human serum sample. In this study we used competitive antigen ELISAs and have identified that this serum sample reacts specifically to the NTPasel epitope, whilst the corresponding region on NTPasell isoform is the less specific cross reactive epitope. These results are consistent with the hypothesis that this patient has been infected with a virulent strain of T. gondii. Copyright© 1999, The Research Center for Protozoan Molecular Immunology.
Jolliffe, KA, Langford, SJ, Oliver, AM, Shephard, MJ & Paddon-Row, MN 1999, 'A New Class of Giant Tetrads for Studying Aspects of Long-Range Intramolecular Electron Transfer Processes: Synthesis and Computational Studies', Chemistry - A European Journal, vol. 5, no. 9, pp. 2518-2530.
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Jolliffe, KA, Langford, SJ, Oliver, AM, Shephard, MJ & Paddon-Row, MN 1999, 'A new class of giant tetrads for studying aspects of long-range intramolecular electron transfer processes: Synthesis and computational studies', Chemistry - A European Journal, vol. 5, no. 9, pp. 2518-2530.
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A modular approach for synthesising the giant multichromophoric systems 19, 20 and 5 · 2PF6 is presented which involves the sequential Diels-Alder reactions of tetraene 7 with the chromophore-based dienophiles 6, 8 and 23. The π-facial stereoselectivity of the Diels-Alder reactions between such building blocks enables the isolation of two major stereoisomers, namely syn,-syn-5·2PF6 and anti,syn-5·2PF6, which differ substantially in their shape. This geometrical difference offers a unique opportunity for the delineation of two mechanisms of photoinduced electron transfer (ET): solvent-mediated ET and through-bridge-mediated ET. The stereochemical assignments of syn,syn-5· 2PF6 and anti,syn-5·2PF6were secured on the basis of 1H NMR and photophysical studies, namely the observation of NOE effects and strong upfield chemical shifts of the bipyridine proton resonances in syn,syn-19, and the observation of photoinduced ET in syn,syn-5·2PF6, but not in anti,syn-5·2PF6. The results of gas-phase semi-empirical (AM1) and ab initio (HF/3-21G) MO calculations also lend support to the interpretation of the NMR studies and to the stereochemical assignments for the two isolated stereoisomers of 5· 2PF6. Importantly, 19 and 52+ are not as rigid as might be expected and give rise to the existence of two conformers for syn,syn-19, and the formation of a closed form for syn,syn-52+ in which the terminal chromophores are separated by a distance of only ≈4 Å in the gas phase.
Jolliffe, KA, Langford, SJ, Ranasinghe, MG, Shephard, MJ & Paddon-Row, MN 1999, 'Design and Synthesis of Two (Pseudo)symmetric Giant Trichromophoric Systems Containing the C60 Chromophore', The Journal of Organic Chemistry, vol. 64, no. 4, pp. 1238-1246.
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Jones, DR, Hannan, CM, Russell-Jones, GJ & Raison, RL 1999, 'Selective B cell non-responsiveness in the gut of the rainbow trout (Oncorhynchus mykiss)', AQUACULTURE, vol. 172, no. 1-2, pp. 29-39.
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In order to assess the potential for the development of economically viable and effective oral vaccines we have examined the humoral immune response resulting from the anal administration of a hapten-carrier conjugate in the posterior intestine of the ra
Jones, PM & George, AM 1999, 'Subunit interactions in ABC transporters: towards a functional architecture', FEMS Microbiology Letters, vol. 179, no. 2, pp. 187-202.
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Kim, DG, Seong, TY, Baik, YJ, Kalceff, MAS & Phillips, MR 1999, 'Cathodoluminescence of diamond films grown on pretreated Si(001) substrates by microwave plasma chemical vapour deposition', DIAMOND AND RELATED MATERIALS, vol. 8, no. 2-5, pp. 712-716.
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Diamond films were grown on a.c. bias-enhanced nucleated Si(001) wafers using different CH4 concentrations by microwave plasma chemical vapour deposition. Cathodoluminescence (CL) spectra from the films exhibit emission components which are associated wi
King, NJ, Tonge, BJ, Mullen, P, Myerson, N, Heyne, D & Ollendick, TH 1999, 'COGNITIVE-BEHAVIOURAL TREATMENT OF SEXUALLY ABUSED CHILDREN: A REVIEW OF RESEARCH', Behavioural and Cognitive Psychotherapy, vol. 27, no. 4, pp. 295-309.
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Child sexual abuse is a prevalent form of child maltreatment that frequently occasions severe disturbance including posttraumatic stress disorder. This review focuses on recent cognitive-behavioural treatment initiatives designed specifically for sexually abused children, and the extent to which they are empirically supported. Our review draws on case studies, open clinical trials, multiple baseline investigations and randomized clinical trials. At first glance, the research findings are encouraging for the efficacy and acceptability of cognitive-behaviour therapy. However, more conservative conclusions are reached when stringent criteria are applied regarding evidentiary support for psychosocial interventions. Directions for future research are also explored.
King, NJ, Tonge, BJ, Turner, S, Heyne, D, Pritchard, M, Rollings, S, Young, D, Myerson, N & Ollendick, TH 1999, 'Brief cognitive-behavioural treatment for anxiety-disordered children exhibiting school refusal', Clinical Psychology & Psychotherapy, vol. 6, no. 1, pp. 39-45.
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This study evaluated the efficacy of a brief intervention programme for 20 anxiety-disordered children exhibiting school refusal. Treatment consisted of individual child cognitive-behaviour therapy and parent/teacher training. Children underwent a comprehensive assessment before and after treatment, and at a 3-month follow-up. Marked improvements were evident on nearly all measures, including school attendance. The findings signal the need for a controlled evaluation in order to establish the efficacy of this cost-efficient intervention. Copyright © 1999 John Wiley & Sons, Ltd.
Kipnis, V, Carroll, RJ, Freedman, LS & Li, L 1999, 'Implications of a New Dietary Measurement Error Model for Estimation of Relative Risk: Application to Four Calibration Studies', American Journal of Epidemiology, vol. 150, no. 6, pp. 642-651.
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Kravtsov, YA, Forbes, GW & Asatryan, AA 1999, 'Theory and applications of complex rays', PROGRESS IN OPTICS, VOL XXXIX, vol. 39, pp. 1-62.
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Latroche, M, Joubert, J-M, Percheron-Guégan, A & Notten, PHL 1999, 'Crystal Structure of Nonstoichiometric Copper-Substituted La(Ni1−zCuz)x Compounds Studied by Neutron and Synchrotron Anomalous Powder Diffraction', Journal of Solid State Chemistry, vol. 146, no. 2, pp. 313-321.
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The structural properties of the potential battery electrode materials LaNi4Cu, LaNi4.4Cu, LaNi5Cu, and LaNi4.5Cu1.5 have been investigated by neutron and anomalous synchrotron powder diffraction. The nonstoichiometry of such ABx (5 ≤ × ≤ 6) compounds has been described in a structure derived from the hexagonal CaCu5-type structure by replacement of the A atoms by dumbbells of B atoms. In these copper-substituted compounds, Cu can occupy any of the four available nickel sites. From a joint refinement procedure using both neutron and synchrotron data, the copper-to-nickel ratio at each B site has been determined. This shows that substitution is not random and that copper occupies some crystallographic sites preferentially. The results are discussed and compared to other substituted AB5 systems. © 1999 Academic Press.
Lee, AP & Reedy, BJ 1999, 'Temperature modulation in semiconductor gas sensing', SENSORS AND ACTUATORS B-CHEMICAL, vol. 60, no. 1, pp. 35-42.
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Leon, R, Okuno, JO, Lawton, RA, Stevens-Kalceff, M, Phillips, MR, Zou, J, Cockayne, DJH & Lobo, C 1999, 'Dislocation-induced changes in quantum dots: Step alignment and radiative emission', APPLIED PHYSICS LETTERS, vol. 74, no. 16, pp. 2301-2303.
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Liang, H, Härdle, W & Carroll, RJ 1999, 'Estimation in a semiparametric partially linear errors-in-variables model', The Annals of Statistics, vol. 27, no. 5, pp. 1519-1535.
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We consider the partially linear model relating a response Y to predictors (X,T) with mean function XTβ + g(T) when the X's are measured with additive error. The semiparametric likelihood estimate of Severini and Staniswalis leads to biased estimates of both the parameter β and the function g(·) when measurement error is ignored. We derive a simple modification of their estimator which is a semiparametric version of the usual parametric correction for attenuation. The resulting estimator of β is shown to be consistent and its asymptotic distribution theory is derived. Consistent standard error estimates using sandwich-type ideas are also developed.
Liao, XZ, Zou, J, Cockayne, DJH, Leon, R & Lobo, C 1999, 'Indium Segregation and Enrichment in CoherentInxGa1−xAs/GaAsQuantum Dots', Physical Review Letters, vol. 82, no. 25, pp. 5148-5151.
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Lin, X & Carroll, RJ 1999, 'SIMEX Variance Component Tests in Generalized Linear Mixed Measurement Error Models', Biometrics, vol. 55, no. 2, pp. 613-619.
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Lobo, C, Leon, R, Marcinkevic̆ius, S, Yang, W, Sercel, PC, Liao, XZ, Zou, J & Cockayne, DJH 1999, 'Inhibited carrier transfer in ensembles of isolated quantum dots', Physical Review B, vol. 60, no. 24, pp. 16647-16651.
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Lockhart, PJ, Howe, CJ, Barbrook, AC, Larkum, A & Penny, D 1999, 'Spectral Analysis, Systematic Bias, and the Evolution of Chloroplasts', Molecular Biology and Evolution, vol. 16, no. 4, pp. 573-576.
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Luo, M, Bilodeau, P, Koltunow, A, Dennis, ES, Peacock, WJ & Chaudhury, AM 1999, 'Genes controlling fertilization-independent seed development in Arabidopsis thaliana', PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, vol. 96, no. 1, pp. 296-301.
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Macnamara, J 1999, 'Research in Public Relations: A review of the use of evaluation and formative research', Asia Pacific Public Relations Journal, vol. 1, no. 2, pp. 107-134.
Martin, PJ, Bendavid, A, Netterfield, RP, Kinder, TJ, Jahan, F & Smith, G 1999, 'Plasma deposition of tribological and optical thin film materials with a filtered cathodic arc source', Surface and Coatings Technology, vol. 112, no. 1-3, pp. 257-260.
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McDonagh, AM, Humphrey, MG, Samoc, M & Luther-Davies, B 1999, 'Organometallic Complexes for Nonlinear Optics. 17.1 Synthesis, Third-Order Optical Nonlinearities, and Two-Photon Absorption Cross Section of an Alkynylruthenium Dendrimer', Organometallics, vol. 18, no. 25, pp. 5195-5197.
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A soluble, oxidatively and thermally very stable alkynylruthenium dendrimer 1,3,5-C6H3(4-CCC6H4CC-trans-[Ru(dppe)2]CC-3,5-C6H3-{4-CCC6H4CC-trans-[Ru(CCPh)(dppe)2]}2)3, containing a large two-dimensional -delocalized system, has been prepared using an experimentally straightforward convergent synthetic approach. The first third-order nonlinear optical (NLO) measurements of an organometallic dendrimer have been obtained using the Z-scan technique at a wavelength of 800 nm. Progression from 1,3,5-C6H3(4-CCC6H4CC-trans-[Ru(dppe)2]CCPh)3 to the dendrimer results in (i) no loss of optical transparency, (ii) an increase in the second hyperpolarizability, , which is proportionately greater than either the increase in the number of phenylethynyl groups or the extinction coefficient for the important MLCT band, and (iii) a dramatic enhancement of two-photon absorption.
McDonagh, AM, Humphrey, MG, Samoc, M, Luther-Davies, B, Houbrechts, S, Wada, T, Sasabe, H & Persoons, A 1999, 'Organometallic Complexes for Nonlinear Optics. 16.1 Second and Third Order Optical Nonlinearities of Octopolar Alkynylruthenium Complexes', Journal of the American Chemical Society, vol. 121, no. 6, pp. 1405-1406.
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Mcdougald, D, Rice, SA & Kjelleberg, S 1999, 'New perspectives on the viable but nonculturable response', Biologia, vol. 54, no. 6, pp. 617-623.
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It has been demonstrated that numerous species of bacteria enter a viable but nonculturable (VBNC) state in response to environmental stress. There have been numerous reports on the physiology of these cells as well as the conditions which induce nonculturability. There have been fewer convincing reports of resuscitation. Thus, our knowledge of the processes involved in induction of the VBNC state has increased significantly while the processes involved in resuscitation of these cells has been less forthcoming. Nonetheless, it is apparent that VBNC formation and resuscitation are important adaptive responses to environmental stress, much like starvation and outgrowth responses. Research in the field of nonculturability has recently seen a shift from the purely physiological characterization of VBNC cells to the examination of the genetic regulation involved in the induction of nonculturability and to the factors required for resuscitation. It has become apparent, that factors such as oxidative stress may play a large role in both the entry into and exit from the VBNC state. In addition, recent evidence indicates that signaling molecules play an important role in adaptive responses. This review will summarize the current research in the field of nonculturability and discuss current directions being taken to further our knowledge of such adaptive responses.
McNevin, D, Barford, J & Hage, J 1999, 'Adsorption and biological degradation of ammonium and sulfide on peat', Water Research, vol. 33, no. 6, pp. 1449-1459.
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McPhedran, RC, Botten, LC, Asatryan, AA, Nicorovici, NA, de Sterke, CM & Robinson, PA 1999, 'Ordered and disordered photonic band gap materials', AUSTRALIAN JOURNAL OF PHYSICS, vol. 52, no. 5, pp. 791-809.
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We discuss a formulation and computer implementation of a new method that can be used to determine the electromagnetic properties of ordered and disordered dielectric and metallic cylinders, using periodic boundary conditions in one direction. We show re
McPhedran, RC, Botten, LC, Asatryan, AA, Nicorovici, NA, Robinson, PA & de Sterke, CM 1999, 'Calculation of electromagnetic properties of regular and random arrays of metallic and dielectric cylinders', PHYSICAL REVIEW E, vol. 60, no. 6, pp. 7614-7617.
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A method is developed to calculate electromagnetic properties of arrays of metallic and dielectric cylinders. It incorporates and exploits cylindrical boundary conditions and Rayleigh identities for efficient, high-accuracy calculation of scattering off
McPhedran, RC, Botten, LC, Asatryan, AA, Nicorovici, NA, Robinson, PA & de Sterke, CM 1999, 'Calculation of electromagnetic properties of regular and random arrays of metallic and dielectric cylinders', Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics, vol. 60, no. 6, pp. 7614-7617.
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A method is developed to calculate electromagnetic properties of arrays of metallic and dielectric cylinders. It incorporates and exploits cylindrical boundary conditions and Rayleigh identities for efficient, high-accuracy calculation of scattering off individual layers that are stacked into arrays using scattering matrices. The method enables absorption, dispersion, and randomness to be incorporated efficiently, and reproduces known results with vastly improved speed and accuracy. It is used to demonstrate existence of states introduced into photonic band gaps of a dielectric array by disorder, and anomalous absorption behavior in arrays of aluminum cylinders. © 1999 The American Physical Society.
McPhedran, RC, Nicorovici, NA, Botten, LC, de Sterke, CM, Robinson, PA & Asatryan, AA 1999, 'Anomalous absorptance by stacked metallic cylinders', OPTICS COMMUNICATIONS, vol. 168, no. 1-4, pp. 47-53.
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We study the transmission, reflection and absorptance of light by stacked periodic gratings consisting of circular metallic wires. We show that the absorptance by such structures of light that is polarized with its electric field parallel to the wires ca
Melander, A, Olsson, J, Lindberg, G, Salzman, A, Howard, T, Stang, P, Lydick, E, Emslie-Smith, A, Boyle, DIR, Evans, JMM, Macdonald, TM, Bain, J, Sullivan, F, Juhl, C, Pørksen, N, Sturis, J, Hollingdal, M, Pincus, S, Veldhuis, J, Dejgaard, A, Schmitz, O, Kristensen, JS, Frandsen, KB, Bayer, T, Müller, P, Dunning, BE, Paladini, S, Gutierrez, C, Deacon, R, Valentin, M, Grunberger, G, Weston, WM, Patwardhan, R, Rappaport, EB, Sargeant, LA, Wareham, NJ, Khaw, KT, Zethelius, B, Lithell, H, Hales, CN, Berne, C, Lakka, H-M, Oksanen, L, Tuomainen, T-P, Kontula, K, Salonen, JT, Dekker, JM, de Boks, P, de Vegt, F, Stehouwer, CDA, Nijpels, G, Bouter, LM, Heine, RJ, Bruno, G, Cavallo-Perin, P, Bargero, G, D’Errico, N, Borra, M, Macchia, G, Pagano, G, Newton, RW, Ruta, DA, New, JP, Wallace, C, Roxburgh, MA, Young, RJ, Vaughan, NJA, Elliott, P, Brennan, G, Devers, M, MacAlpine, R, Steinke, D, Lawson, DH, Decallonne, B, Casteels, K, Gysemans, C, Bouillon, R, Mathieu, C, Linn, T, Strate, C, Schneider, K, Funda, DP, Jirsa, M, Kozáková, H, Kaas, A, Kofronová, O, Tlaskalová-Hogenová, H, Buschard, K, Wanka, H, Hartmann, A, Kuttler, B, Rasmussen, SB, Sørensen, TS, Markholst, H, Petersen, JS, Karounos, D, Dyrberg, T, Mabley, JG, Haskó, G, Szabó, C, Seissler, J, Nguyen, TBT, Steinbrenner, H, Scherbaum, WA, Cipriani, R, Gabriele, A, Sensi, M, Guidobaldi, L, Pantellini, F, Cerrito, MG, Scarpa, S, Di Mario, U, Morano, S, Ceolotto, G, Iori, E, Baritono, E, Del Prato, S, Semplicini, A, Trevisan, R, Zerbini, G, Meregalli, G, Asnaghi, V, Tentori, F, Maestroni, A, Mangili, R, Marescotti, C, Vedovato, M, Tiengo, A, Tadjieva, J, Mankovsky, BN, Van Aken, S, Raes, A, Vande Walle, J, Matthys, D, Craen, M, Hansen, HP, Lund, SS, Rossing, P, Jensen, T, Parving, H-H, Andersen, S, Tarnow, L, Hansen, BV, Trautner, C, Haastert, B, Ennenbach, N, Willich, S, Tabák, ÁG, Orchard, TJ, Spranger, J, Preissner, KT, Schatz, H, Pfeiffer, A, Cantón, A, Burgos, R, Hernández, C, Lecube, A, Mesa, J, Segura, RM, Mateo, C, Simó, R, Fathallah, L, Greene, DA, Obrosova, I, Gilbert, RE, Kelly, DJ, Cox, AJ, Berka-Wilkinson, JL, Taylor, HR, Panagiotopoulos, S, Lee, V, Jerums, G, Cooper, ME, Hitman, GA, Aganna, E, Ogunkolade, WB, Rema, M, Deepa, R, Shanthi-Rani, CS, Barakat, K, Kumarajeewa, TR, Cassell, PG, McDermott, MF, Mohan, V, Ways, K, Bursell, S, Devries, T, Woodworth, J, Alatorre, C & et al. 1999, '35th Annual Meeting of the European Association for the Study of Diabetes', Diabetologia, vol. 42, no. S1, pp. A1-A330.
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Miller, CM, Smith, NC, Luton, K, Dobbin, CA & Johnson, AM 1999, 'Immunogenicity of toxoplasma gondii heat shock protein 70', Journal of Protozoology Research, vol. 9, no. 4, pp. 113-121.
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Heat shock proteins (HSPs) are a group of proteins involved in maintaining cell homeostasis. Their synthesis is increased dramatically in response to stimuli such as temperature shifts, changes in concentrations of glucose and calcium and also in response to immune factors. HSP70 has been found to be strongly expressed in virulent strains of Toxoplasma gondii taken from immunocompetent mice but poorly expressed in avirulent strains taken from immunocompromised mice or virulent and avirulent strains cultivated in vitro. Hence, T. gondii HSP70 may help protect parasites against the host's immune response, allowing the virulent strains to persist as tachyzoites without the enforced encystation found in avirulent strains. This makes T. gondii HSP70 an attractive subunit candidate. To investigate the immunogenicity of this protein it was affinity purified from tachyzoites of the virulent RH strain and injected into BALB/c mice along with Freund's Complete Adjuvant (FCA). A booster shot with Freund's Incomplete Adjuvant (FIA) was given 4 weeks after the initial injection and blood was collected at 8 weeks. The RH strain HSP70 DNA was cloned as a GST fusion protein, expressed and also injected into BALB/c mice to see if the immune response generated by the recombinant protein matched that of the native protein. Antibody response was measured by ELISAs to detect IgGl, IgG2a, IgG2b and IgG3. An elevation of IgGl antibodies, but not other IgG subsets, was observed in the mice immunised with native or recombinant HSP70. This suggests that the immune response seen with the recombinant protein is similar to that seen with the native protein. However, the response to either protein was weak, suggesting that the T. gondii HSP70 may not be a particularly good immunogen.Copyright© 1999, The Research Center for Protozoan Molecular Immunology.
Miller, CMD, Smith, NC & Johnson, AM 1999, 'Cytokines, nitric oxide, heat shock proteins and virulence in Toxoplasma', PARASITOLOGY TODAY, vol. 15, no. 10, pp. 418-422.
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Elucidating the factors that play important roles in the expression of virulence by parasites is crucial to understanding disease pathogenesis and to developing control strategies rationally. Here, Kate Miller, Nick Smith and Alan Johnson, using Toxoplas
Mugridge, NB, Morrison, DA, Heckeroth, AR, Johnson, AM & Tenter, AM 1999, 'Phylogenetic analysis based on full-length large subunit ribosomal RNA gene sequence comparison reveals that Neospora caninum is more closely related to Hammondia heydorni than to Toxoplasma gondii1Note: Nucleotide sequence data reported in this paper are available in the EMBL, GenBank™ and DDJB databases under the accession numbers AF159240 (Hammondia heydorni), AF101077 (Hammondia hammondi), AF076899 (Sarcocystis tenella) and AF076901 (Toxoplasma gondii ME49 strain).1', International Journal for Parasitology, vol. 29, no. 10, pp. 1545-1556.
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Since its first description in the late 1980s, Neospora caninum has been recognised as a prominent tissue cyst-forming parasite due to its ability to induce congenital disease and abortion in animals, especially cattle. It is found worldwide and is a cause of significant economic losses for the livestock industry. However, its place within the family Sarcocystidae, like that of several other taxa, remains unresolved. Neospora caninum shares several morphological and life cycle characters with Hammondia heydorni, although it is most commonly thought of as being a close relative of Toxoplasma gondii. This study presents information regarding the phylogenetic relationship of N. caninum to species currently classified into the genus Hammondia, as well as to two strains (RH and ME49) of T. gondii based on the full-length large subunit ribosomal RNA gene. Phylogenetic analyses using two alignment strategies and three different tree-building methods showed that the two species in the genus Hammondia are paraphyletic. Neospora caninum was shown to form a monophyletic clade with H. heydorni instead of T. gondii, which in turn was shown to be most closely related to H. hammondi. The finding that N. caninum and H. heydorni are closely related phylogenetically may aid the elucidation of currently unknown aspects of their biology and epidemiology, and suggests that H. heydorni should be considered in the differential diagnosis of N. caninum from other apicomplexan parasites.
Murray, BR, Dickman, CR, Watts, CHS & Morton, SR 1999, 'The dietary ecology of Australian desert rodents', WILDLIFE RESEARCH, vol. 26, no. 4, pp. 421-437.
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Very little systematic information has been collected on the diets of Australian rodents in arid and semiarid regions. The information that is available is restricted generally to short periods of sampling and small sample sizes. Here we review the diets
Murray, BR, Rice, BL, Keith, DA, Myerscough, PJ, Howell, J, Floyd, AG, Mills, K & Westoby, M 1999, 'Species in the tail of rank-abundance curves', ECOLOGY, vol. 80, no. 6, pp. 1806-1816.
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At focal sites within dry sclerophyll woodland and temperate rain forest, species were identified that were of low local abundance and hence in the tail of the rank-abundance curve. We then asked the question: What proportion of tail species within a giv
Murray, F, Llewellyn, D, McFadden, H, Last, D, Dennis, ES & Peacock, WJ 1999, 'Expression of the Talaromyces flavus glucose oxidase gene in cotton and tobacco reduces fungal infection, but is also phytotoxic', MOLECULAR BREEDING, vol. 5, no. 3, pp. 219-232.
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Murray, S & Suthers, IM 1999, 'Population ecology of Noctiluca scintillans Macartney, a red-tide-forming dinoflagellate', MARINE AND FRESHWATER RESEARCH, vol. 50, no. 3, pp. 243-252.
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The population ecology of the large heterotrophic dinoflagellate Noctiluca scintillans Macartney was examined in the coastal ocean and two estuaries in south-eastern Australia from July 1996 to June 1997. High concentrations (>100 cells LÂ1) occurred in spring and again in late summer, and low concentrations (<5 cells LÂ1) in mid summer and mid winter. Abundances were greater in coastal waters than in the estuaries during all months in which concentration exceeded 1 cell LÂ1. During the spring bloom, Noctiluca cells from coastal stations had small diameters (340Â450 mm), a high nutritional status and a high proportion of division stages, indicative of good condition. During the late summer blooms, poor-condition cells were found in coastal waters and especially in the near-surface concentrations of red tides (>104 cells LÂ1), and were characterized by large diameters (400Â1200 mm), cell lysis and uniformly low nutritional status; at this time, Noctiluca cells from estuaries were generally fewer, smaller and in better condition. Overall, cell concentrations were higher in coastal waters than in the estuaries, and red tides of Noctiluca probably developed along the local coast (in spring) or were advected into the area from northern regions (in late summer).
Nassif, NT, Kok, C, Lobo, GP & Nicholson, GA 1999, 'Prostate cancer risk and repeat (CAG and GGN) polymorphism of the androgen receptor gene in an Australian population.', AMERICAN JOURNAL OF HUMAN GENETICS, vol. 65, no. 4, pp. A312-A312.
Notten, PHL 1999, 'Electrochromic metal hydrides', Current Opinion in Solid State and Materials Science, vol. 4, no. 1, pp. 5-10.
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The striking discovery that yttrium thin films could be reversibly switched with hydrogen gas between the reflective and transparent state, very recently induced electrochromic research on rare-earth hydride-forming thin film electrodes. Reversible optical switching can also be accomplished by electrochemical means and switchable mirror properties can be adjusted by alloying.
Notten, PHL, Latroche, M & Percheron‐Guégan, A 1999, 'The Influence of Mn on the Crystallography and Electrochemistry of Nonstoichiometric AB 5 ‐ Type Hydride‐Forming Compounds', Journal of The Electrochemical Society, vol. 146, no. 9, pp. 3181-3189.
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The influence of Mn content and the degree of nonstoichiometry on the crystallography, electrochemical stability, and electrode morphology in non-stoichiometric AB5-type hydride-forming compounds was studied. The electrochemical stability is strongly dependent on both the chemical and nonstoichiometric composition. Electrochemically stable materials are characterized by the absence of a significant particle-size reduction upon electrode cycling, reducing the overall oxidation rate. Unstable materials suffer from severe mechanical cracking through which the oxidation rate is increased. The improved mechanical stability is attributed to the reduced discrete lattice expansion.
Novikov, A & Valkeila, E 1999, 'On some maximal inequalities for fractional Brownian motions', Statistics & Probability Letters, vol. 44, no. 1, pp. 47-54.
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We prove some maximal inequalities for fractional Brownian motions. These extend the Burkholder-Davis-Gundy inequalities for fractional Brownian motions. The methods are based on the integral representations of fractional Brownian motions with respect to a certain Gaussian martingale in terms of beta kernels. © 1999 Elsevier Science B.V.
Novikov, A, Frishling, V & Kordzakhia, N 1999, 'Approximations of boundary crossing probabilities for a Brownian motion', Journal of Applied Probability, vol. 36, no. 04, pp. 1019-1030.
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Using the Girsanov transformation we derive estimates for the accuracy of piecewise approximations for one-sided and two-sided boundary crossing probabilities. We demonstrate that piecewise linear approximations can be calculated using repeated numerical integration. As an illustrative example we consider the case of one-sided and two-sided square-root boundaries for which we also present analytical representations in a form of infinite power series.
Novikov, A, Frishling, V & Kordzakhia, N 1999, 'Approximations of boundary crossing probabilities for a Brownian motion', Journal of Applied Probability, vol. 36, no. 4, pp. 1019-1030.
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Using the Girsanov transformation we derive estimates for the accuracy of piecewise approximations for one-sided and two-sided boundary crossing probabilities. We demonstrate that piecewise linear approximations can be calculated using repeated numerical integration. As an illustrative example we consider the case of one-sided and two-sided square-root boundaries for which we also present analytical representations in a form of infinite power series.
Novikov, AA 1999, 'Hedging of Options with a Given Probability', Theory of Probability & Its Applications, vol. 43, no. 1, pp. 135-143.
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We consider a model of a complete market with two assets under the suggestion that an investor may hedge the payoff function with the given probability; in othei words, the investor should have capital not less than the given payoff function with probability not less than 1 - α (α is a given significance level). Under some limitations on a class of hedging strategies we find a lower bound for an option price (that it, for the initial capital of the investor) and construct a hedge (the investor strategy) for which this lower bound is achieved. For examples, we calculate the price and hedge of a European call option and also an American call option with a barrier condition.
Oakey, HJ, Gibson, LF & George, AM 1999, 'DNA probes specific forAeromonas hydrophila(HG1)', Journal of Applied Microbiology, vol. 86, no. 2, pp. 187-193.
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Ollendick, TH & Finney, JW 1999, 'Cognitive behavioral treatment of trichotillomania', Cognitive and Behavioral Practice, vol. 6, no. 2, pp. 167-173.
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In this brief commentary, we suggest that the cognitive-behavioral treatment of trichotillomania is a complex but rewarding venture. We review the two case studies of hair pulling presented by Roblek, Detweiler, Fearing, and Albano (1999) and comment on an individualized, prescriptive approach to assessment, conceptualization, and treatment. A clinical and functional analysis that is informed by the context in which the hair-pulling behavior occurs is espoused.
Ollendick, TH & King, NJ 1999, 'Child behavioral assessment and cognitive-behavioral interventions in schools', Psychology in the Schools, vol. 36, no. 5, pp. 427-436.
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In this article, we first review the basic principles and practices of child behavioral assessment. We define child behavioral assessment as an exploratory, hypothesis-testing approach in which a variety of procedures are used to: a) understand a given child, group, or social ecology; and b) plan and implement an intervention based on that understanding. Next, we examine the effects of cognitive-behavioral interventions in the treatment of school refusal. We conclude that although broad-based cognitive-behavioral procedures are generally effective with school-refusing youngsters, they can be enhanced by a prescriptive treatment approach in which assessment information is used to tailor the treatment to the specified problem of a given school-refusing child. Different conditions that serve to motivate school refusal are used to illustrate this approach. © 1999 John Wiley & Sons, Inc.
Ollendick, TH & Vasey, MW 1999, 'Developmental Theory and the Practice of Clinical Child Psychology', Journal of Clinical Child Psychology, vol. 28, no. 4, pp. 457-466.
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Examined developmental theory and its relevance for the practice of clinical child psychology. Following a brief review of basic principles of developmental psychology and developmentalpsychopathology, implications of a developmental perspective are explored for the diagnosis, assessment, and treatment of childhood disorders. Although it is obvious that many developmental issues confront the clinical child psychologist and that we have learned much about translating developmental theory into clinical practice, we conclude we have a long way to go before we can assert that a true developmental-clinical child interface has been realized.
Ollendick, TH, Seligman, LD, Butcher, AT & M.Div 1999, 'Does Anxiety Mitigate the Behavioral Expression of Severe Conduct Disorder in Delinquent Youths?', Journal of Anxiety Disorders, vol. 13, no. 6, pp. 565-574.
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The purpose of this article is to examine the purported attenuating effects of comorbid anxiety on conduct disturbance in a sample of youths exhibiting severe Conduct Disorder (CD). Further, we examined the differential expression of CD and comorbid anxiety in male and female youths. Seventy-nine incarcerated youths between the ages of 12 and 19 were interviewed using the Diagnostic Interview Schedule for Children. Youths were identified who exhibited CD and CD plus an anxiety disorder. In contrast to previous findings with younger, less seriously disturbed male subjects, no overall differences were found between CD anxious and CD nonanxious youths in terms of age of first offense and overall number and severity of delinquent acts. Moreover, no differences were found between males and females, and gender did not moderate the effects of comorbidity anxiety on outcome measures. Findings suggest purported mitigating effects of anxiety on conduct disturbance may be attenuated in severe forms of CD and support the notion that comorbidity across internalizing and externalizing domains of child and adolescent psychopathology may differentially impact clinical presentation of disordered behavior depending on the severity of externalizing behavioral disturbance. Copyright (C) 2000 Elsevier Science Ltd.
Opsomer, JD, Ruppert, D, Wand, MP, Holst, U & Hössjer, O 1999, 'Kriging with Nonparametric Variance Function Estimation', Biometrics, vol. 55, no. 3, pp. 704-710.
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Orsini, F, du Pasquier, A, Beaudouin, B, Tarascon, JM, Trentin, M, Langenhuizen, N, de Beer, E & Notten, P 1999, 'In situ SEM study of the interfaces in plastic lithium cells', Journal of Power Sources, vol. 81-82, pp. 918-921.
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Padungtod, C, Hassold, TJ, Millie, E, Ryan, LM, Savitz, DA, Christiani, DC & Xu, X 1999, 'Sperm aneuploidy among Chinese pesticide factory workers: Scoring by the FISH method', AMERICAN JOURNAL OF INDUSTRIAL MEDICINE, vol. 36, no. 2, pp. 230-238.
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Padungtod, C, Niu, TH, Wang, ZX, Savitz, DA, Christiani, DC, Ryan, LM & Xu, XP 1999, 'Paraoxonase polymorphism and its effect on male reproductive outcomes among Chinese pesticide factory workers', AMERICAN JOURNAL OF INDUSTRIAL MEDICINE, vol. 36, no. 3, pp. 379-387.
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Background Sei um paraoxonase has been associated with the metabolism of organophosphate pesticides in humans. Molecular analysis of the human paraoxonase gene (PON1) has revealed that Arg(192) homozygotes have a greater detoxifying capability than Gln(192) homozygotes. We examined the effects of PON1 genotypes on male reproductive outcomes and its interaction with exposure to organophosphate pesticides. Methods We studied 60 Chinese pesticide-factory workers and 89 textile-factory workers who were unexposed to pesticides. The respective allele frequencies of Arg(192) and Gln(192) were 0.62 and 0.38. Pesticide exposure among 36 exposed subjects and 12 unexposed subjects, regardless of gender was assessed by personal measurement of pesticide residues over an entire 8-hr shift and measurement of urinary p-nitrophenol level over a 24-hr period. We analyzed semen and hormone data collected from male subjects. Results When the three PON1 genotypes were analyzed separately, a gene dose effect was not detected, We used rite unexposed Arg(192) homo/heterozygotes as the reference group, and re-analyzed the data. Exposed Arg(192) homo/heterozygotes had significantly lower sperm count (chi(2) = 9.01, P < 0.01) and lower percentage of sperm with normal morphology (chi(2) = 4.18, P < 0.05) than the reference group. Both unexposed Gln(192) homozygotes (chi(2) = 4.90 P < 0.05) and exposed Arg(192) homo/heterozygotes (chi(2) = 10.00, P < 0.01) showed significantly lower sperm concentrations than the reference group. In addition, exposed Arg(192) homo/heterozygotes had significantly higher serum LH levels (chi(2) = 7.94, P < 0.01) than the reference group. Conclusions Because of a small sample size, our findings are highly preliminary: Nevertheless, it calls for further investigation of the interaction between the PON1 genotype and organophosphate pesticide exposure on male reproductive outcomes.
Patiag, D, Qu, X, Wilkes, M, Gray, S, Seale, JP & Donnelly, R 1999, 'Effects Of Angiotensin Ii And At(1) & At(2) Receptor Blockade On Glucose And Lipid Metabolism In Vivo And In Vitro.', Diabetologia, vol. 42, pp. 1-1.
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Petterd, CI, Hamshere, J, Stewart, S, Brinch, K, Masi, T & Roux, C 1999, 'Glass particles in the clothing of members of the public in south-eastern Australia – a survey', Forensic Science International, vol. 103, no. 3, pp. 193-198.
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This study was undertaken to test the validity of the proposal that there is a natural background level of glass particles on the surface of clothing of members of the community. A total of 2008 upper outer garments collected from random members of the p
Phillips, MR & Ott, DM 1999, 'Crosstalk due to optical fiber nonlinearities in WDM CATV lightwave systems', JOURNAL OF LIGHTWAVE TECHNOLOGY, vol. 17, no. 10, pp. 1782-1792.
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CrosstaIk in a two-wavelength 1550-nm standard fiber system at subcarrier frequencies 50-800 MHz is investigated. The dependence of the crosstalk on subcarrier frequency, wavelength spacing, and optical power is measured and analyzed. The observed crosst
Phillips, MR & Ott, DM 1999, 'WDM lightwave system crosstalk by optical Kerr effect with polarisation-dependent loss', ELECTRONICS LETTERS, vol. 35, no. 20, pp. 1764-1765.
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WDM-system crosstalk is generated by nonlinear polarisation modulation (the optical Kerr effect) followed by polarisation dependent loss (PDL). Theory and experiment Show that at typical PDL values, this crosstalk. can exceed that from stimulated Raman s
Phillips, MR, Toth, M & Drouin, D 1999, 'Depletion layer imaging using a gaseous secondary electron detector in an environmental scanning electron microscope', APPLIED PHYSICS LETTERS, vol. 75, no. 1, pp. 76-78.
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We present a method for imaging depletion layers using the gaseous secondary electron detector (GSED) employed in environmental scanning electron microscopes. GSED images of a p-n junction were obtained from a Si P+PN power diode. Behavior of the junctio
Platen, E 1999, 'Axiomatic principles for a market model', Journal of Applied Probability, vol. 36, no. 1, pp. 295-300.
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Potischman, N, Carroll, RJ, Iturria, SJ, Mittl, B, Curtin, J, Thompson, FE & Brinton, LA 1999, 'Comparison of the 60- and 100-Item NCI-Block Questionnaires With Validation Data', Nutrition and Cancer, vol. 34, no. 1, pp. 70-75.
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Poulos, O'Meara, Sporik & Tovey 1999, 'Detection of inhaled Der p 1', Clinical & Experimental Allergy, vol. 29, no. 9, pp. 1232-1238.
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BACKGROUND:Measurement of personal exposure to Der p 1 aeroallergen has previously been limited by the low quantity of material collected by sampling systems and the assay sensitivity. This has meant that exposure could only be detected if long sampling periods were used or reservoir dust was artificially disturbed. We have developed a sampling method to sample true personal exposure and combined it with a novel method which is sensitive enough to measure allergen exposure over shorter time frames. OBJECTIVE:To describe normal domestic exposure to dust mite allergen during a range of activities in houses in Sydney, Australia. METHODS:Inhaled particles containing mite allergen Der p 1 were collected using a nasal air sampler which impacts particles (> approximately 5 microm) onto a protein-binding membrane coated with a thin, porous, adhesive film. The allergen is bound to the membrane in the immediate vicinity of the particle and detected by immunostaining with monoclonal antibodies specific for Der p 1. In addition, samples were collected using a standard Institute of Occupational Medicine (IOM) personal air sampler and the amount of eluted Der p 1 was assayed by ELISA. RESULTS:The median number (range) of inhaled particles containing Der p 1 collected in each 10-min sampling period was: dust raising 5 (2-10); lying in bed, 0 (0-2); sitting on the bed, 1 (0-2); walking around the bedroom, 0 (0-2). This represented 0-5.1% of all particles captured. The Der p 1 concentration of floor and bed dust was 19.4 and 55.1 microg/g, respectively. The standard IOM personal sampler and ELISA were unable to detect Der p 1 for any of the activities performed. CONCLUSIONS:We were able to count individual allergen-carrying particles inhaled over short time periods, during different domestic exposure situations. This will offer new insight into several aspects of personal allergen exposure.
Poulton, CG, Botten, LC, McPhedran, RC & Movchan, AB 1999, 'Source-neutral Green's functions for periodic problems in electrostatics, and their equivalents in electromagnetism', PROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES, vol. 455, no. 1983, pp. 1107-1123.
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We consider source-neutral problems for periodic problems in electrostatics. These may be used to derive an identity due to Lord Rayleigh entirely within the context of the unit cell, and without use of reasoning based on contributions from charges at an
Qi, L, Leslie, LM & Zhao, SX 1999, 'Cut-off low pressure systems over southern Australia: climatology and case study', International Journal of Climatology, vol. 19, no. 15, pp. 1633-1649.
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Qu, X, Seale, JP & Donnelly, R 1999, 'Tissue and isoform-selective activation of protein kinase C in insulin-resistant obese Zucker rats - effects of feeding', JOURNAL OF ENDOCRINOLOGY, vol. 162, no. 2, pp. 207-214.
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The mechanisms of insulin resistance in the obese Zucker rat have not been clearly established but increased diacylglycerol-protein kinase C (DAG-PKC) signalling has been associated with decreased glucose utilisation in states of insulin resistance and n
QU, X, SEALE, JP & DONNELLY, R 1999, 'Tissue- and isoform-specific effects of aging in rats on protein kinase C in insulin-sensitive tissues', Clinical Science, vol. 97, no. 3, pp. 355-355.
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The mechanisms responsible for the age-related decline in insulin sensitivity have not been clearly identified, but activation of the diacylglycerol/protein kinase C (PKC) signalling pathway (often confined to individual isoforms of PKC) has recently bee
QU, X, SEALE, JP & DONNELLY, R 1999, 'Tissue- and isoform-specific effects of aging in rats on protein kinase C in insulin-sensitive tissues', Clinical Science, vol. 97, no. 3, pp. 355-361.
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The mechanisms responsible for the age-related decline in insulin sensitivity have not been clearly identified, but activation of the diacylglycerol/protein kinase C (PKC) signalling pathway (often confined to individual isoforms of PKC) has recently been implicated in the pathogenesis of other insulin-resistant states in both humans and animal models. Fasting serum glucose, insulin and triacylglycerol (triglyceride) concentrations, and results of oral glucose tolerance tests, were compared in groups of 6-week-old (n = 8) and 6-month-old (n = 8) Sprague–Dawley rats. Insulin-responsive tissues (liver, soleus muscle and epididymal fat pad) were collected to compare levels of diacylglycerol, PKC enzyme activity and protein expression of individual PKC isoforms in cytosol and membrane fractions. The older group were heavier (556±14 g, compared with 188±7 g) and relatively insulin-resistant and hyperinsulinaemic (477±73 pM compared with 293±51 pM; P < 0.05) compared with young rats; they also had greater areas under the serum glucose (old, 20.3±1.1; young, 17.3±0.7 mmol·h-1·l-1) and insulin (old, 1254±76; young, 721±113 mmol·h-1·l-1) profiles following an oral glucose tolerance test, and significantly higher fasting triacylglycerol levels (old, 1.24±0.06 mM; young, 0.92±0.07 mM; P < 0.01). There were no age-related differences in diacylglycerol levels or PKC activity in muscle and liver, but membrane-associated PKC activity was 2.5-fold higher in the adipose tissue of older rats (101±19 compared with 40±5 pmol·min-1·mg-1 protein; P < 0.05) due to increased translocation of PKC-βI, -βII and -ε. Thus insulin resistance due to normal aging is associated with tissue- and isoform-specific changes in diacylglycerol/PKC signalling. In contrast with diabetes and dietary-induced insulin resistance, there were no changes in diacylglycerol/PKC signalling in skeletal muscle and liver, but isoform-specific translocation and higher PKC activity in adipose tissue ma...
Ralph, PJ 1999, 'Light-induced photoinhibitory stress responses of laboratory-cultured Halophila ovalis', BOTANICA MARINA, vol. 42, no. 1, pp. 11-22.
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This paper details experiments performed to investigate the short-term stress effects of both high and low-light regimes on laboratory-cultured Halophila ovalis using chlorophyll fluorescence. Increasing irradiance up to 400 mu mol quanta m(-2) s(-1) on
Ralph, PJ 1999, 'Photosynthetic response of Halophila ovalis (R-Br.) Hook. f. to combined environmental stress', AQUATIC BOTANY, vol. 65, no. 1-4, pp. 83-96.
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Combinations of stresses showed an additive effect in comparison to the individual stress responses. It is apparent from these results that thermal, elevated-light or osmotic stress increases the sensitivity of Halophila ovalis to any of the other stress
Ralph, PJ, Gademann, R, Larkum, AWD & Schreiber, U 1999, 'In situ underwater measurements of photosynthetic activity of coral zooxanthellae and other reef-dwelling dinoflagellate endosymbionts', MARINE ECOLOGY PROGRESS SERIES, vol. 180, pp. 139-147.
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Chlorophyll fluorescence was used to assess the iu situ photosynthesis of a range of reef-dwelling endosymbionts. Such non-intrusive in situ measurements became possible after the recent development of a submersible pulse modulated fluorometer (DIVING-PA
Ramsland, PA, Brock, CR, Moses, J, Robinson, BG, Edmundson, AB & Raison, RL 1999, 'Structural aspects of human IgM antibodies expressed in chronic B lymphocytic leukemia', IMMUNOTECHNOLOGY, vol. 4, no. 3-4, pp. 217-229.
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Background: Malignant B cells from patients with chronic B lymphocytic leukemia (B CLL) generally express both surface IBM and the pan T cell antigen CD5, a characteristic of the B1 population of B lymphocytes. The IgM on the surface of these B CLL cells
Reid, HJ & Leslie, LM 1999, 'Modeling Coastally Trapped Wind Surges over Southeastern Australia. Part I: Timing and Speed of Propagation', Weather and Forecasting, vol. 14, no. 1, pp. 53-66.
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Reimers, JR & Hall, LE 1999, 'The solvation of acetonitrile', JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, vol. 121, no. 15, pp. 3730-3744.
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Reimers, JR & Hush, NS 1999, 'Electron and energy transfer through bridged systems. 9. Toward a priori evaluation of the intermetallic coupling in bis-metal complexes', JOURNAL OF PHYSICAL CHEMISTRY A, vol. 103, no. 16, pp. 3066-3072.
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Reimers, JR & Hush, NS 1999, 'Vibrational Stark spectroscopy 3. Accurate benchmark ab initio and density functional calculations for CO and CN-', JOURNAL OF PHYSICAL CHEMISTRY A, vol. 103, no. 49, pp. 10580-10587.
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Reimers, JR, Hall, LE, Crossley, MJ & Hush, NS 1999, 'Rigid fused oligoporphyrins as potential versatile molecular wires. 2. B3LYP and SCF calculated geometric and electronic properties of 98 oligoporphyrin and related molecules', JOURNAL OF PHYSICAL CHEMISTRY A, vol. 103, no. 22, pp. 4385-4397.
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Ryan, L & Molenberghs, G 1999, 'Statistical methods for developmental toxicity - Analysis of clustered multivariate binary data', UNCERTAINTY IN THE RISK ASSESSMENT OF ENVIRONMENTAL AND OCCUPATIONAL HAZARDS, vol. 895, pp. 196-211.
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This paper discusses some of the statistical issues that arise from developmental toxicity studies, wherein pregnant mice are exposed to chemicals in order to assess possible adverse effects on developing Fetuses. We begin with a review of some current approaches to risk assessment, based on NOAELs, and provide justification for the use of methods based on dose-response models, Due to the hierarchical nature of the data, such models are more complicated in the present context than, say, in cancer studies. For example, multivariate binary outcomes arise when each fetus in a litter is assessed for the presence of malformations and/or tow birth weight. We describe a multivariate exponential family model that works well for these data and that is flexible in terms of allowing response rates to depend on cluster size. Maximum Likelihood estimation of model parameters and the construction of score tests for dose effect are briefly discussed. Results are illustrated with data from several NTP studies.
Sammel, M, Lin, XH & Ryan, L 1999, 'Multivariate linear mixed models for multiple outcomes', STATISTICS IN MEDICINE, vol. 18, no. 17-18, pp. 2479-2492.
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We propose a multivariate linear mixed (MLMM) for the analysis of multiple outcomes, which generalizes the latent variable model of Sammel and Ryan, The proposed model assumes a flexible correlation structure among the multiple outcomes, and allows a global test of the impact of exposure across outcomes. In contrast to the Sammel-Ryan model, the MLMM separates the mean and correlation parameters so that the mean estimation will remain reasonably robust even if the correlation is misspecified. The model is applied to birth defects data, where continuous data on the size of infants who were exposed to anticonvulsant medications in utero are compared to controls.
San Gil, F, Turner, B, Walker, MJ, Djordjevic, SP & Chin, JC 1999, 'Contribution of adjuvant to adaptive immune responses in mice against Actinobacillus pleuropneumoniae', Microbiology, vol. 145, no. 9, pp. 2595-2603.
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Sanni, LA, Fu, SL, Dean, RT, Bloomfield, G, Stocker, R, Chaudhri, G, Dinauer, MC & Hunt, NH 1999, 'Are reactive oxygen species involved in the pathogenesis of murine cerebral malaria?', JOURNAL OF INFECTIOUS DISEASES, vol. 179, no. 1, pp. 217-222.
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To investigate the involvement of oxidative tissue damage in the pathogenesis of murine cerebral malaria (CM), brain levels of protein carbonyls, 3,4-dihydroxyphenylalanine(DOPA), 0-tyrosine, and dityrosine were measured during Plasmodium berghei ANKA (PbA) and P. berghei K173 (PbK) infections. During PbA infection in a CM model, brain levels of the substances were similar to those in uninfected mice. The role of phagocyte-derived reactive oxygen species in the pathogenesis of CM was examined in $gp91_{phox}$ gene knockout mice. The course of CM in these mice was the same as in their wild type counterparts. To examine whether superoxide production in the central nervous system could have occurred via increased xanthine oxidase activity, brain concentrations of urate were measured in CM mice and in mice infected with PbK (which does not cause CM). Brain urate concentration increased significantly in both groups of mice, suggesting that purine breakdown is not specific to CM. These results indicate that reactive oxygen species probably do not contribute to the pathogenesis of murine CM
Sano, EE, Huete, AR & Moran, MS 1999, 'Estimation of surface roughness in a semiarid region from C-band ERS-1 synthetic aperture radar data', Revista Brasileira de Ciência do Solo, vol. 23, no. 4, pp. 903-908.
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In this study, we investigated the feasibility of using the C-band European Remote Sensing Satellite (ERS-1) synthetic aperture radar (SAR) data to estimate surface soil roughness in a semiarid rangeland. Radar backscattering coefficients were extracted from a dry and a wet season SAR image and were compared with 47 in situ soil roughness measurements obtained in the rocky soils of the Walnut Gulch Experimental Watershed, southeastern Arizona, USA. Both the dry and the wet season SAR data showed exponential relationships with root mean square (RMS) height measurements. The dry C-band ERS-1 SAR data were strongly correlated (R² = 0.80), while the wet season SAR data have somewhat higher secondary variation (R² = 0.59). This lower correlation was probably provoked by the stronger influence of soil moisture, which may not be negligible in the wet season SAR data. We concluded that the single configuration C-band SAR data is useful to estimate surface roughness of rocky soils in a semiarid rangeland.
Saunders, Frank & Orme 1999, 'Granuloma formation is required to contain bacillus growth and delay mortality in mice chronically infected with Mycobacterium tuberculosis', Immunology, vol. 98, no. 3, pp. 324-328.
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Schlogl, E 1999, 'A Multicurrency Extension of the Lognormal Interest Rate Market Models', Finance and Stochastics, vol. 6, no. 2, pp. 173-196.
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Schulte, J 1999, 'Effects of potentization in aqueous solutions', British Homoeopathic journal, vol. 88, no. 4, pp. 155-160.
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Over the past two decades, research into structure formation and structure conservation in water has created a significant interest among the homeopathy research community. The formation of sustained static and dynamic structures in aqueous solutions is thought to be synonymous with the possible storage of information in associated liquids. Prominent models and experiments considering this possibility are presented in this paper, and some of their subtleties, which were not given much room in the respective original publications, will be elucidated in more detail here.
Schulte, J, Schevschenko, P & Radchik, A 1999, 'Nonlinear field effects in quadrupole mass filters', Review of Scientific Instrument, vol. 70, no. 9, pp. 1-6.
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The performance of a quadrupole mass filter (QMF) generally degrades when using electrodes of circular cross section in place of mathematical ideal hyperbolic electrodes. The circular cross section of electrodes produces nonlinear resonances resulting in distortion and peak splitting in mass spectra. In addition, resonances reduce the actual working cross section, resulting in limited ion yield. In this article we study nonlinear resonances and intensities of resonance lines passing through the tip of the stability diagram of the QMF. We have found that balancing of multipole terms, rather than eliminating individual multipole terms, improves the sensitivity of the QMF considerably. The theory for assessing intensities of nonlinear resonances is presented in detail along with rescaling laws to adjust current QMF parameter settings. A general formula is presented from which the location and intensity of nonlinear can be derived, which then may be used for the design of special purpose QMFs.
Schulte, J, Shevchenko, PV & Radchik, AV 1999, 'Nonlinear field effects in quadrupole mass filters', Review of Scientific Instruments, vol. 70, no. 9, pp. 3566-3571.
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Semmler, ABT, Whitchurch, CB & Mattick, JS 1999, 'A re-examination of twitching motility in Pseudomonas aeruginosa', MICROBIOLOGY-SGM, vol. 145, no. 1, pp. 2863-2873.
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Twitching motility is a form of solid surface translocation which occurs in a wide range of bacteria and which is dependent on the presence of functional type IV fimbriae or pili. A detailed examination of twitching motility in Pseudomonas aeruginosa und
Sheldon, CC, Burn, JE, Perez, PP, Metzger, J, Edwards, JA, Peacock, WJ & Dennis, ES 1999, 'The FLF MADS box gene: A repressor of flowering in Arabidopsis regulated by vernalization and methylation', PLANT CELL, vol. 11, no. 3, pp. 445-458.
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Simpson, AM, Szymanska, B, Tuch, BE & Marshall, GM 1999, 'Secretion and storage of insulin from a human hepatoma cell line (HUH7-INS)', TRANSPLANTATION PROCEEDINGS, vol. 31, no. 1-2, pp. 812-812.
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NA
Singleton, CB, Valenzuela, SM, Walker, BD, Tie, H, Wyse, KR, Bursill, JA, Qiu, MR, Breit, SN & Campbell, TJ 1999, 'Blockade by N-3 polyunsaturated fatty acid of the Kv4.3 current stably expressed in Chinese hamster ovary cells', British Journal of Pharmacology, vol. 127, no. 4, pp. 941-948.
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The Kv4.3 gene is believed to encode a large proportion of the transient outward current (I-to), responsible for the early phase of repolarization of the human cardiac action potential. There is evidence that this current is involved in the dispersion of refractoriness which develops during myocardial ischaemia and which predisposes to the development of potentially fatal ventricular tachyarrhythmias. Epidemiological, clinical, animal, and cellular studies indicate that these arrhythmias may be ameliorated in myocardial ischaemia by n-3 polyunsaturated fatty acids (n-3 PUFA) present in fish oils. We describe stable transfection of the Kv4.3 gene into a mammalian cell line (Chinese hamster ovary cells), and using patch clamp techniques have shown that the resulting current closely resembles human I-to. The current is rapidly activating and inactivating, with both processes being well fit by double exponential functions (time constants of 3.8 +/- 0.2 and 5.3 +/- 0.4 ms for activation and 20.0 +/- 1.2 and 96.6 +/- 6.7 ms for inactivation at +45 mV at 23 degrees C). Activation and steady state inactivation both show voltage dependence (V-1/2 Of activation = -6.7 +/- 2.5 mV, V-1/2 Of steady state inactivation = -51.3 +/- 0.2 mV at 23 degrees C). Current inactivation and recovery from inactivation are faster at physiologic temperature (37 degrees C) compared to room temperature (23 degrees C). The n-3 PUFA docosahexaenoic acid blocks the Kv4.3 current with an IC50 of 3.6 mu mol L-1. Blockade of the transient outward current may be an important mechanism by which n-3 PUFA provide protection against the development of ventricular fibrillation during myocardial ischaemia.
Skinner, TCL & Leslie, LM 1999, 'Numerical Prediction of the Summertime Ridge–Trough System over Northeastern Australia', Weather and Forecasting, vol. 14, no. 3, pp. 306-325.
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Smith, AK, Ajani, PA & Roberts, DE 1999, 'Spatial and temporal variation in fish assemblages exposed to sewage and implications for management', Marine Environmental Research, vol. 47, no. 3, pp. 241-260.
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Marine Environmental Research
Volume 47, Issue 3, April 1999, Pages 241-260
Spatial and temporal variation in fish assemblages exposed to sewage and implications for management (Article)
Smith, A.K.ab , Ajani, P.A.c, Roberts, D.E.d
a Ctr. for Marine and Coastal Studies, University of NSW, 2052, Sydney, NSW, Australia
b NSW Fisheries, Locked Bag 9, NSW, 2009, Pyrmont, NSW, Australia
c Water Studies Section, Environ. Protect. Auth., Locked B., Bankstown, NSW 2200, Australia
View references (59)
Abstract
Underwater visual surveys, involving a Before/After/Control/Impact (BACI) experimental design, were used to investigate the abundance and species richness of temperate rocky reef fishes and the abundance of a sea urchin following the discharge of sewage effluent from a deepwater outfall. Multivariate analyses indicated that fish assemblages were significantly different at the outfall and control locations, and these differences were largely attributed to the declines in relative abundance of several common, resident species of reef fish, such as the eastern hulafish, Trachinops taeniatus and yellowtail Trachurus novaezelandiae and the sea urchin Centrostephanus rodgersii. Univariate analysis indicated that the abundance and richness of groups of fish and individual species varied over times, periods and locations. The abundance and species richness of fish from the outfall location were generally less than for fish assemblages at the control locations. We detected decreases of 33% in the species richness of fish and 50% in the abundance of Centrostephanus rodgersii at the outfall location and, conversely, the abundances of some cryptic (small, cave dwelling or camoflagued) fishes increased over time at the outfall. This study indicates that the discharge of sewage effluent resu...
Smith, GB & Dligatch, S 1999, 'Ellipsometric studies of nanocomposite cermets', NANOSTRUCTURED MATERIALS, vol. 12, no. 1-4, pp. 535-538.
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The three pairs of complex refractive indices and the direction of the optical axis for metal insulator thin film composites in which the very small metal particles form narrow tilted columns I-which are arranged asymmetrically have been found using a co
Smith, GB & Reuben, AJ 1999, 'Normal mode analysis of optical polarisation response in nanocomposite particles', NANOSTRUCTURED MATERIALS, vol. 12, no. 1-4, pp. 353-356.
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A new technique for establishing the spectral density and resonance positions of normal optical modes in fine particle systems is outlined and applied to finite chains of closely spaced aluminium cylinders. The method uses multiple conformal frames and a
Smith, GB, Swift, PD & Bendavid, A 1999, 'TiNx films with metallic behavior at high N/Ti ratios for better solar control windows', APPLIED PHYSICS LETTERS, vol. 75, no. 5, pp. 630-632.
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Using cathodic arc deposition with 700 eV nitrogen ion assistance, metallic response in TiNx thin films to at least NperTiequals1.3 is found. Metallic behavior is usually limited to NperTi ratios just above 1.1. Defects are almost exclusively Ti vacancie
Stoler, JM, McGuirk, CK, Lieberman, E, Ryan, L & Holmes, LB 1999, 'Malformations reported in chorionic villus sampling exposed children: A review and analytic synthesis of the literature', GENETICS IN MEDICINE, vol. 1, no. 7, pp. 315-322.
Stuart, BH 1999, 'Fourier transform Raman spectroscopy of polymer mixtures', Current Trends in Polymer Science, vol. 4, pp. 273-278.
Ton-That, C, Teare, DOH, Campbell, PA & Bradley, RH 1999, 'Surface characterisation of ultraviolet-ozone treated PET using atomic force microscopy and X-ray photoelectron spectroscopy', SURFACE SCIENCE, vol. 433, pp. 278-282.
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Torpy, FR, Morrison, DA & Bloomfield, BJ 1999, 'The influence of fire frequency an arbuscular mycorrhizal colonization in the shrub Dillwynia retorta (Wendland) Druce (Fabaceae)', MYCORRHIZA, vol. 8, no. 6, pp. 289-296.
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Toth, M & Phillips, MR 1999, 'Detection of Cr impurities in GaN by room temperature cathodoluminescence spectroscopy', APPLIED PHYSICS LETTERS, vol. 75, no. 25, pp. 3983-3985.
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Trace levels of Cr impurities in epitaxial GaN grown on sapphire substrates were investigated using cathodoluminescence (CL) spectroscopy. CL emissions characteristic of Cr in an octahedral crystal field were observed from beta-Ga2O3 overlayers produced
Toth, M, Fleischer, K & Phillips, MR 1999, 'Direct experimental evidence for the role of oxygen in the luminescent properties of GaN', PHYSICAL REVIEW B, vol. 59, no. 3, pp. 1575-1578.
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We present experimental evidence of electron-beam-induced diffusion of O and H in unintentionally doped n-type GaN grown on a sapphire substrate. Impurity diffusion was investigated using cathodoluminescence kinetics and imaging at 4 and 300 K and by wav
Toth, M, Fleischer, K & Phillips, MR 1999, 'Electron beam induced impurity electro-migration in unintentionally doped GaN', MRS INTERNET JOURNAL OF NITRIDE SEMICONDUCTOR RESEARCH, vol. 4, pp. 1-6.
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Electron beam induced electromigration of O-N(+) and H+ impurities in unintentionally n-doped GaN was investigated using cathodoluminescence (CL) kinetics profiling, CL imaging of regions pre-irradiated with a stationary electron beam, and wavelength dis
Tuch, BE, Wright, DC, Martin, TE, Keogh, GW, Deol, HS, Simpson, AM, Roach, W & Pinto, AN 1999, 'DIFFERENTIATION OF FETAL PIG ENDOCRINE CELLS AFTER ALLOGRAFTING INTO THE THYMUS GLAND1', Transplantation, vol. 67, no. 8, pp. 1184-1187.
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Background. The thymus of large animals, such as the pig, is thought to be an appropriate site for transplanting adult islets, which contain numerous beta cells, for the purpose of reversing diabetes, Whether fetal islet-like cell clusters (ICCs), which
Tuch, BE, Wright, DC, Martin, TE, Keogh, GW, Deol, HS, Simpson, AM, Roach, W & Pinto, AN 1999, 'Fetal pig endocrine cells develop when allografted into the thymus gland', Transplantation Proceedings, vol. 31, no. 1-2, pp. 670-670.
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NA
van Leeuwen, WJD, Huete, AR & Laing, TW 1999, 'MODIS vegetation index compositing approach: A prototype with AVHRR data', REMOTE SENSING OF ENVIRONMENT, vol. 69, no. 3, pp. 264-280.
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In this study, the 16-day MODIS (MODerate resolution Imaging Spectroradiometer) vegetation index (VI) compositing algorithm and product were described, evaluated, and compared with the current AVHRR (Advanced Very High Resolution Spectroradiometer) maximum value composite (MVC) approach. The MVC method selects the highest NDVI (normalized difference vegetation index) over a certain time interval. The MODIS VI compositing algorithm emphasizes a global and operational view angle standardization approach: a reflectance-based BRDF (Bidirectional Reflectance Distribution Function) model, succeeded by a back-up MVC algorithm that includes a view angle constraint. A year's worth of daily global AVHRR data was used to prototype the MODIS vegetation index compositing algorithm. The composite scenarios were evaluated with respect to: 1) temporal evolution of the VI for different continents and vegetation types, 2) spatial continuity of the VI, 3) quality flags related to data integrity, cloud cover, and composite method, and 4) view angle distribution of the composited data. On a continental scale, the composited NDVI values from the MODIS algorithm were as much as 30% lower than the mostly, off-nadir NDVI results based on the MVC criterion. The temporal evolution of the NDVI values derived with the MODIS algorithm were similar to the NDVI values derived from the MVC algorithm. A simple BRDF model was adequate to produce nadir equivalent reflectance values from which the NDVI could be computed. Application of the BRDF and back-up components in the MODIS algorithm were dependent on geographic location and season, for example, the BRDF interpolation was most frequently applied in arid and semiarid regions, and during the dry season over humid climate vegetation types. Examples of a MODIS-like global NDVI map and associated quality flags were displayed using a pseudo color bit mapping scheme.
van Reyk, DM & Jessup, W 1999, 'The macrophage in atherosclerosis: modulation of cell function by sterols', JOURNAL OF LEUKOCYTE BIOLOGY, vol. 66, no. 4, pp. 557-561.
van Reyk, DM, Jessup, W & Dean, RT 1999, 'Prooxidant and antioxidant activities of macrophages in metal-mediated LDL oxidation - The importance of metal sequestration', ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, vol. 19, no. 4, pp. 1119-1124.
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Walker, BD, Singleton, CB, Bursill, JA, Wyse, KR, Valenzuela, SM, Qiu, MR, Breit, SN & Campbell, TJ 1999, 'Inhibition of the human ether-a-go-go-related gene (HERG) potassium channel by cisapride: affinity for open and inactivated states', British Journal of Pharmacology, vol. 128, no. 2, pp. 444-450.
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Cisapride is a prokinetic agent which has been associated with QT prolongation, torsades de pointes and cardiac arrest. The cellular mechanism for these observations is high affinity blockade of I-Kr (encoded by HERG). In a chronic transfection model using CHO-K1 cells, cisapride inhibited HERG tail currents after a step to + 25 mV with similar potency at room and physiological temperatures (IC50 16.4 nM at 20-22 degrees C and 23.6 nM at 37 degrees C). Channel inhibition exhibited time-, voltage- and frequency-dependence. In an envelope of tails test, channel blockade increased from 27+/-8% after a 120 ms depolarizing step to 50+/-4% after a 1.0 s step. These findings suggested affinity for open and/or inactivated channel states. Inactivation was significantly accelerated by cisapride in a concentration-dependent manner and there was a small (-7 mV) shift in the voltage dependence of steady state inactivation. Channel blockade by cisapride was modulated by [K+](o), with a 26% reduction in the potency of channel blockade when [K+](o) was increased from 1 to 10 mM. In conclusion, HERG channel inhibition by cisapride exhibits features consistent with open and inactivated state binding and is sensitive to external potassium concentration. These features may have significant clinical implications with regard to the mechanism and treatment of cisapride-induced proarrhythmia.
Walker, BD, Valenzuela, SM, Singleton, CB, Tie, H, Bursill, JA, Wyse, KR, Qiu, MR, Breit, SN & Campbell, TJ 1999, 'Inhibition of HERG channels stably expressed in a mammalian cell line by the antianginal agent perhexiline maleate', British Journal of Pharmacology, vol. 127, no. 1, pp. 243-251.
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Perhexiline has been used as an anti-anginal agent for over 25 years, and is known to cause QT prolongation and torsades df pointes. We hypothesized that the cellular basis for these effects was blockade of I-Kr. A stable transfection of HERG into a CHO-KI cell line produced a delayed rectifier, potassium channel with similar properties to those reported for transient expression in Xenopus oocytes. Perhexiline caused voltage- and frequency-dependent block of HERG (IC50 7.8 mu M). The rate of inactivation was increased and there was a 10 mV hyperpolarizing shift in the voltage-dependence of steady-state inactivation, suggestive of binding to the inactivated state. In conclusion, perhexiline potently inhibits transfected HERG channels and this is the probable mechanism for QT prolongation and torsades de pointes. Channel blockade shows greatest affinity for the inactivated state.
Wand, M 1999, 'Miscellanea. On the optimal amount of smoothing in penalised spline regression', Biometrika, vol. 86, no. 4, pp. 936-940.
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Wand, MP 1999, 'A Central Limit Theorem for Local Polynomial Backfitting Estimators', Journal of Multivariate Analysis, vol. 70, no. 1, pp. 57-65.
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Wand, MP 1999, 'Correction: Data-Based Choice of Histogram Bin Width', The American Statistician, vol. 53, no. 2, pp. 174-174.
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Wang, GX, Yao, P, Zhong, S, Bradhurst, DH, Dou, SX & Liu, HK 1999, 'Electrochemical study on orthorhombic LiMnO2 as cathode in rechargeable lithium batteries', Journal of Applied Electrochemistry, vol. 29, no. 12, pp. 1423-1426.
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Wang, S 1999, 'High-order accurate methods for retrospective sampling problems', Biometrika, vol. 86, no. 4, pp. 881-897.
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Weber, P & Reimers, JR 1999, 'Ab initio and density functional calculations of the energies of the singlet and triplet valence excited states of pyrazine', JOURNAL OF PHYSICAL CHEMISTRY A, vol. 103, no. 48, pp. 9821-9829.
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Weber, P & Reimers, JR 1999, 'Ab initio and density-functional calculations of the vibrational structure of the singlet and triplet excited states of pyrazine', JOURNAL OF PHYSICAL CHEMISTRY A, vol. 103, no. 48, pp. 9830-9841.
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Wei, M, Ruys, AJ, Milthorpe, BK & Sorrell, CC 1999, 'Solution ripening of hydroxyapatite nanoparticles: Effects on electrophoretic deposition', JOURNAL OF BIOMEDICAL MATERIALS RESEARCH, vol. 45, no. 1, pp. 11-19.
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Electrophoretic deposition is a low-cost, simple, and flexible coating method for producing hydroxyapatite (Hap) coatings on metal implants. However, densification requires heating the coated metal to high temperatures, which, for commercial HAp powders, generally means at least 1200°C. At such temperatures, the metal tends to react with the HAp coating, inducing decomposition, and the strength of titanium and stainless steel implants is severely degraded. With the use of raw uncalcined nanoparticulate Hap, densification can occur at 900°-1050°C; however, such coatings are prone to cracking due to the high drying shrinkage. This problem was solved by precipitating nanoparticulate HAp by the metathesis process [10Ca(NO3)2 + 6NH4H2PO4 + 8NH4OH] and optimizing the 30 nm of nanoprecipitates by an Ostwald ripening approach, that is, by boiling and/or ambient aging in the mother liquor. While the as-precipitated nanoparticles produced severely cracked coatings, 2 h of boiling or 10 days of ambient aging ripened the gel-like mass into unagglomerated nanoparticles, which produced crack-free coatings. Since boiling enhanced particle size but ambient aging did not, crack elimination probably was due to the transition from the highly agglomerated gel-like state to the dispersed nanoparticulate state rather than to particle growth. Furthermore, boiling only reduced the amount of cracking whereas aging completely eliminated cracking.
Wei, M, Ruys, AJ, Swain, MV, Kim, SH, Milthorpe, BK & Sorrell, CC 1999, 'Interfacial bond strength of electrophoretically deposited hydroxyapatite coatings on metals', JOURNAL OF MATERIALS SCIENCE-MATERIALS IN MEDICINE, vol. 10, no. 7, pp. 401-409.
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Weller, E, Long, N, Smith, A, Williams, P, Ravi, S, Gill, J, Henessey, R, Skornik, W, Brain, J, Kimmel, C, Kimmel, G, Holmes, L & Ryan, L 1999, 'Dose-rate effects of ethylene oxide exposure on developmental toxicity', TOXICOLOGICAL SCIENCES, vol. 50, no. 2, pp. 259-270.
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In risk assessment, evaluating a health effect at a duration of exposure that is untested involves assuming that equivalent multiples of concentration (C) and duration (T) of exposure have: the same effect. The limitations of this approach (attributed to F. Haber, Zur Geschichte des Gaskrieges [On the history of gas warfare], in Funf Vortrage aus den Jahren 1920-1923 [Five lectures from the years 1920-1923], 1924, Springer, Berlin, pp. 76-92), have been noted in several studies. The study presented in this paper was designed to specifically look at dose-rate (C x T) effects, and it forms an ideal case study to implement statistical models and to examine the statistical issues in risk assessment. Pregnant female C57BL/6J mice were exposed, on gestational day 7, to ethylene oxide (EtO) via inhalation for 1.5, 3;, or 6 h at exposures that result in C x T multiples of 2100 or 2700 ppm-hi EtO was selected because of its short half-life, documented developmental toxicity, and relevance to exposures that occur in occupational settings. Concurrent experiments were run with animals exposed to air for similar periods. Statistical analysis using models developed to assess dose-rate effects revealed significant effects with respect to fetal death and resorptions, malformations, crown-to-rump length, and fetal weight. Animals exposed to short, high exposures of EtO on day 7 of gestation were found to have more adverse effects than animals exposed to the same C x T multiple but at longer, lower exposures. The implication for risk assessment is that applying Haber's Law could potentially lead to an underestimation of risk at a shorter duration of exposure and an overestimation of risk at a longer duration of exposure. Further research, toxicological and statistical, are required to understand the mechanism of the dose-rate effects, and how to incorporate the mechanistic information into the risk assessment decision process.
Worland, S, Guerreiro, N, Yip, L, Djordjevic, MA, Weinman, JJ, Djordjevic, SP & Rolfe, BG 1999, 'Rhizobium purine auxotrophs, perturbed in nodulation, have multiple changes in protein synthesis', Functional Plant Biology, vol. 26, no. 6, pp. 511-511.
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We investigated the infectivity, growth ability and the overall biochemical
status of Rhizobium purine auxotrophs to determine why
these strains show varied nodulation phenotypes on their host plants. Strains
ANU2861 (purM::Tn5) and ANU2866
(purY::Tn5), both derivatives of
ANU280, are unable to nodulate siratro plants. In contrast, strain L1
(purF::Tn5ssgusA40), a derivative
of ANU843, is able to induce fully-developed nodules and normal levels of
nodulation on several clover hosts. To our knowledge, strain L1 is the only
genetically-defined pur–
mutant capable of inducing fully-developed nodules on a legume host. None of
the pur– mutants are able to
grow at normal rates in vitro even in the presence of
purine pathway supplements including AICA-riboside. Further, the nodulation
ability of the strain ANU280
pur– mutants is unable to be
restored by the addition of AICA-riboside. Full growth and nodulation ability
can only be restored to the
pur– mutants by genetic
complementation. We confirmed that supplementation of
pur intermediates failed to fully restore wild-type
growth by using proteome analysis to examine the overall biochemical status of
the mutants. Proteome analysis demonstrated that the purine mutants possess
multiple changes in the protein species present. In addition, strain ANU2866
but not strains ANU2861 or L1 could not tolerate the effects of nutrient
step-up or step-down transitions, and failed to produce any colonies on
laboratory media. Collectively, these data show that purine auxotrophs suffer
pleiotropic effects at the level of protein synthesis and their overall
metabolism is compromised. Therefore, care should be exercised in concluding
that purine intermediates or by-products of this pathway are required
per se for nodule development.
Yardley, JG, McPhedran, RC, Nicorovici, NA & Botten, LC 1999, 'Addition formulas and the Rayleigh identity for arrays of elliptical cylinders', PHYSICAL REVIEW E, vol. 60, no. 5, pp. 6068-6080.
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We apply the Rayleigh method to solve the problem where a uniform electrostatic held is imposed upon a rectangular array of elliptical cylinders embedded in a matrix of unit dielectric constant. This new formulation overcomes geometric restrictions inher